Escherichia coli NCTC8006 |
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Putative Escherichia coli NCTC8006 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,316,176 bp
GenBank #: UFYX00000000 (NZ_UFYX00000000)
REBASE acronym: Eco8006
Org_num: 43761
All begin NCTC8006_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4328 | Uncharacterized conserved protein | |||
| 4330 | S | S.Sbo192ORF9605P (100% identity) | GAANNNNNNNNGTGG | S.Eco8006I |
| 4331 | M | M.Sbo192ORF9605P (100% identity) | GAANNNNNNNNGTGG | M.Eco8006I |
| 4332 | R | Sbo192ORF9605P (100% identity) | GAANNNNNNNNGTGG | Eco8006IP |
| 4333 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 37 | prophage protein | |||
| 38 | M | M.EcoC9706ORF4146P (100% identity) | M.Eco8006ORF38P | |
| 39 | phage regulatory protein | |||
| 3177 | DNA-binding protein Fis | |||
| 3178 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco8006ORF3178P |
| 3179 | IS1 transposase | |||
| 3305 | ribulose-phosphate 3-epimerase | |||
| 3306 | M | M.Sdy59952DamP (100% identity) | GATC | M.Eco8006Dam |
| 3307 | DamX protein | |||
| 4830 | phosphohydrolase | |||
| 4831 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco8006DcmP |
| 4832 | V | V.EcosEC7DcmP (100% identity) | V.Eco8006DcmP | |
| 4833 | DMT superfamily transporter inner | |||
| 4963 | Uncharacterised protein | |||
| 4964 | M | M.EcoS945ORF3560P (100% identity) | M.Eco8006ORF4964P | |
| 4969 | Lysis protein S | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4327 | IS1 transposase | |||
| 4328 | R | EcoSTEC508GmrSDP (100% identity) | Eco8006GmrSDP | |
| 4330 | Type I restriction enzyme EcoAI specificity | |||