Escherichia coli NCTC8003 |
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Putative Escherichia coli NCTC8003 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,260,845 bp
GenBank #: UGDX00000000 (NZ_UGDX00000000)
REBASE acronym: Eco8003
Org_num: 43760
All begin NCTC8003_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3408 | Uncharacterised protein | |||
| 3409 | R | Sbo192ORF9605P (100% identity) | GAANNNNNNNNGTGG | Eco8003IIP |
| 3410 | M | M.Sbo192ORF9605P (100% identity) | GAANNNNNNNNGTGG | M.Eco8003II |
| 3411 | S | S.Sbo192ORF9605P (100% identity) | GAANNNNNNNNGTGG | S.Eco8003II |
| 3413 | endoribonuclease SymE | |||
| 5301 | hydrolase | |||
| 5302 | R | SenSMo01ORF8345P (99% identity) | TCAGNNNNNNTGC | Eco8003IP |
| 5303 | metal-binding protein | |||
| 5304 | S | S.SenSMo01ORF8345P (100% identity) | TCAGNNNNNNTGC | S.Eco8003I |
| 5305 | M | M.SenSMo01ORF8345P (100% identity) | TCAGNNNNNNTGC | M.Eco8003I |
| 5306 | Holin | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5390 | Uncharacterised protein | |||
| 5391 | M | M.EcoZLWTORF24570P (99% identity) | M.Eco8003ORF5391P | |
| 5392 | Uncharacterised protein | |||
| 686 | protein NinB | |||
| 687 | M | M.Ecog991ORF15005P (99% identity) | M.Eco8003ORF687P | |
| 688 | addiction module antidote-like protein | |||
| 1701 | prophage protein | |||
| 1702 | M | M.EcoC9706ORF4146P (100% identity) | M.Eco8003ORF1702P | |
| 1703 | phage regulatory protein | |||
| 1819 | Lysis protein S | |||
| 1824 | M | M.EcoS945ORF3560P (100% identity) | M.Eco8003ORF1824P | |
| 1825 | Uncharacterised protein | |||
| 1950 | DMT superfamily transporter inner | |||
| ??? | V | V.EcosEC7DcmP (100% identity) | V.Eco8003DcmP | |
| ??? | M | M.EcoC13452Dcm (99% identity) | M.Eco8003DcmP | |
| 1954 | phosphohydrolase | |||
| 4387 | DamX protein | |||
| 4388 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco8003DamP |
| 4389 | ribulose-phosphate 3-epimerase | |||
| 4516 | membrane protein | |||
| 4517 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco8003ORF4517P |
| 4518 | DNA-binding protein Fis | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3413 | endoribonuclease SymE | |||
| 3414 | R | EcoSTEC508GmrSDP (100% identity) | Eco8003GmrSDP | |
| 3415 | protein YjiS | |||