Escherichia coli NCTC7927 |
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Putative Escherichia coli NCTC7927 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,417,962 bp
GenBank #: UGAK00000000 (NZ_UGAK00000000)
REBASE acronym: Eco7927
Org_num: 43758
All begin NCTC7927_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3676 | ybl103 | |||
| 3677 | M | M.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | M.Eco7927I |
| 3678 | S | S.Ecos2020ORFCP (100% identity) | YTCANNNNNNGTTY | S.Eco7927I |
| 3679 | Uncharacterised protein | |||
| 3680 | RNase III inhibitor | |||
| 3681 | R | EcoUM1886ORF17525P (99% identity) | YTCANNNNNNGTTY | Eco7927IP |
| 3682 | hydrolase | |||
| 4753 | restriction endonuclease | |||
| 4754 | M | M.Esp9308ORFIP (99% identity) | CGTANNNNNGTC | M.Eco7927II |
| 4755 | S | S.EcoSH3ORF25175P (100% identity) | CGTANNNNNGTC | S.Eco7927II |
| 4756 | R | EcoR31ORF16485P (91% identity) | CGTANNNNNGTC | Eco7927IIP |
| 4757 | transposase ORF B, IS1 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 468 | DamX protein | |||
| 469 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco7927Dam |
| 470 | ribulose-phosphate 3-epimerase | |||
| 591 | membrane protein | |||
| ??? | M | M.EcoVCSW7ORF2325P (99% identity) | ATGCAT | M.Eco7927ORF592P |
| 593 | DNA-binding protein Fis | |||
| 1015 | ATP-dependent endonuclease (OLD family | |||
| 1016 | R | EcoDLI5aORF8980P (100% identity) | Eco7927ORF1017P | |
| 1017 | M | M.EcoR37ORF3180P (100% identity) | M.Eco7927ORF1017P | |
| 1018 | Prophage integrase | |||
| 1585 | transposase family protein | |||
| 1586 | M | M.EcoSO173ORF23940P (100% identity) | M.Eco7927ORF1586P | |
| 1587 | Protein of uncharacterised function (DUF826) | |||
| 2249 | phosphohydrolase | |||
| 2250 | M | M.EcoC9777DcmP (99% identity) | CCWGG | M.Eco7927DcmP |
| 2251 | V | V.SsoSE61DcmP (99% identity) | V.Eco7927DcmP | |
| 2252 | DMT superfamily transporter inner | |||
| 3100 | TolA protein (fragment) of prophage | |||
| 3103 | M | M.EcoSCU103ORF10815P (99% identity) | M.Eco7927ORF3103P | |
| 3104 | lipoprotein | |||
| 3319 | TciA/TerB-like protein | |||
| 3323 | M | M.Eco1385ORF10540P (99% identity) | M.Eco7927ORF3323P | |
| 3324 | lipoprotein | |||
| 3327 | phage protein | |||
| 3328 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | Eco7927ORFAP |
| ??? | M | M.EcoB1109aORFBP (100% identity) | GCCGGC | M.Eco7927ORFAP |
| 3330 | prophage protein | |||
| 4376 | Uncharacterised protein | |||
| 4377 | M | M.KpnFF77ORF20840P (100% identity) | GGTACC | M.Eco7927III |
| 4378 | site-specific recombinase, phage integrase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 990 | transposase | |||
| 991 | R | Eco7922ORF3620P (99% identity) | Eco7927ORF992P | |
| 992 | M | M.Eco7922ORF3620P (98% identity) | M.Eco7927ORF992P | |
| 993 | Uncharacterised protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4761 | endoribonuclease SymE | |||
| 4762 | R | EcoDLI5aGmrSDP (99% identity) | Eco7927GmrDP | |
| 4763 | protein YjiS | |||