Escherichia coli NCTC13919 |
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Putative Escherichia coli NCTC13919 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,336,338 bp
GenBank #: UARQ00000000 (NZ_UARQ00000000)
REBASE acronym: Eco13919
Org_num: 43748
All begin NCTC13919_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1920 | Uncharacterized conserved protein | |||
| 1922 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco13919I |
| 1923 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.Eco13919I |
| 1924 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco13919IP |
| 1925 | methylated adenine and cytosine restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14 | cytoplasmic protein | |||
| 15 | M | M.Sso8ORF23800P (100% identity) | SAY | M.Eco13919ORF15P |
| 16 | YfdA | |||
| 206 | membrane protein | |||
| 207 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco13919ORF207P |
| 208 | DNA-binding protein Fis | |||
| 2231 | Replication gene A protein (GpA) | |||
| 2232 | M | M.Sbo812ORFEP (100% identity) | M.Eco13919ORF2232P | |
| 2233 | Uncharacterised protein | |||
| 3376 | Uncharacterised protein | |||
| 3377 | M | M.Sen21974ORF23385P (100% identity) | M.Eco13919ORF3377P | |
| 3378 | Uncharacterised protein | |||
| 3533 | DMT superfamily transporter inner | |||
| 3534 | V | V.SflSTLE3DcmP (100% identity) | V.Eco13919DcmP | |
| 3535 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco13919DcmP |
| 3536 | phosphohydrolase | |||
| 5100 | DamX protein | |||
| 5101 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco13919Dam |
| 5102 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1919 | transposase YhgA-like protein | |||
| 1920 | R | EcoSP15GmrSDP (100% identity) | Eco13919GmrSDP | |
| 1922 | EcoKI restriction-modification system protein | |||
| 1924 | type I restriction enzyme EcoKI subunit R | |||
| 1925 | R | EcosS1MrrP (100% identity) | Eco13919MrrP | |
| 1926 | GTP-binding protein YjiA | |||