Escherichia coli NCTC13463 |
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Putative Escherichia coli NCTC13463 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,268,602 bp
GenBank #: UFZC00000000 (NZ_UFZC00000000)
REBASE acronym: Eco13463
Org_num: 43746
All begin NCTC13463_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3819 | Uncharacterised protein | |||
| 3821 | R | EcoW25IIP (100% identity) | GCANNNNNNNTTTA | Eco13463IP |
| 3822 | S | S.EcoW1316ORF930P (66% identity) | GCANNNNNNNTTTA | S.Eco13463I |
| 3823 | M | M1.EcoPSJ22ORF35460P (100% identity) | GCANNNNNNNTTTA | M.Eco13463I |
| 3824 | GTP-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5257 | Uncharacterised protein | |||
| 5259 | M | M.EcoP136ORF28430P (100% identity) | M.Eco13463ORF5259P | |
| 5260 | Uncharacterised protein | |||
| 5367 | YfdA | |||
| 5368 | M | M.SenBR027ORFEP (100% identity) | SAY | M.Eco13463ORF5368P |
| 5369 | cytoplasmic protein | |||
| 1030 | ybl17 | |||
| 1031 | M | M.EfeC13ORF14690P (78% identity) | M.Eco13463ORF1031P | |
| 1032 | exonuclease | |||
| 1652 | TraR/DksA family transcriptional regulator | |||
| 1653 | M | M.EcoSTEC506ORF16525P (100% identity) | GATC | M.Eco13463ORF1653P |
| 1654 | replication protein for prophage | |||
| 3000 | DMT superfamily transporter inner | |||
| 3001 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco13463DcmP |
| 3002 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco13463Dcm |
| 3003 | phosphohydrolase | |||
| 3718 | replication protein for prophage | |||
| 3719 | M | M.SspS13ORF8710P (99% identity) | GATC | M.Eco13463ORF3719P |
| 3720 | TraR/DksA family transcriptional regulator | |||
| 4529 | DNA-binding protein Fis | |||
| 4530 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco13463ORF4530P |
| 4531 | membrane protein | |||
| 4657 | ribulose-phosphate 3-epimerase | |||
| 4658 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco13463DamP |
| 4659 | DamX protein | |||
| 4848 | LexA repressor | |||
| 4849 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Eco13463ORF4849P |
| 4850 | CPS-53 (KpLE1) prophage protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 158 | AIPR protein | |||
| 159 | M | M.EcoSO178ORF20185P (100% identity) | GTCTC | M.Eco13463II |
| 160 | R | Ecow264ORF380P (100% identity) | GTCTC | Eco13463IIP |
| 161 | Uncharacterised protein | |||