Escherichia coli NCTC13167 |
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Putative Escherichia coli NCTC13167 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,855,866 bp
GenBank #: UFYY00000000 (NZ_UFYY00000000)
REBASE acronym: Eco13167
Org_num: 43736
All begin NCTC13167_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 900 | Uncharacterised protein | |||
| 901 | R | Sen0537IIIP (99% identity) | GAGNNNNNRTGC | Eco13167IP |
| 902 | S | S.Eco45MSORFAP (96% identity) | GAGNNNNNRTGC | S.Eco13167I |
| 903 | M | M.EcoK2921ORF21790P (100% identity) | GAGNNNNNRTGC | M.Eco13167I |
| 904 | Uncharacterized conserved protein | |||
| 1268 | ISEhe3, transposase orfB | |||
| 1269 | M | M.Eco703CCORF14960P (100% identity) | M.Eco13167ORF1269P | |
| 1270 | S | S.EcoB27ORF10860P (86% identity) | S1.Eco13167ORF1269P | |
| 1271 | IS1 transposase | |||
| 1272 | IS1 transposase | |||
| ??? | S | S.Eco11132ORF2240P (14% identity) | S2.Eco13167ORF1269P | |
| 1273 | R | Eco703CCORF14960P (100% identity) | Eco13167ORF1269P | |
| 1274 | addiction module antidote-like protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 105 | Uncharacterised protein | |||
| ??? | M | M.Eco13167ORF4569P (76% identity) | M.Eco13167ORF106P | |
| 108 | Uncharacterised protein | |||
| 55 | cytoplasmic protein | |||
| 56 | M | M.SflN101ORF24625P (100% identity) | M.Eco13167ORF56P | |
| 57 | YfdA | |||
| 458 | DamX protein | |||
| 459 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco13167DamP |
| 460 | ribulose-phosphate 3-epimerase | |||
| 588 | membrane protein | |||
| 589 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco13167ORF589P |
| 590 | DNA-binding protein Fis | |||
| 1978 | phosphohydrolase | |||
| 1979 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco13167DcmP |
| 1980 | V | V.SsoSE61DcmP (100% identity) | V.Eco13167DcmP | |
| 1981 | DMT superfamily transporter inner | |||
| 3696 | Holin | |||
| 3697 | M | M.SflLIN17ORF17405P (100% identity) | M.Eco13167ORF3697P | |
| 3698 | lipoprotein | |||
| 3705 | LexA repressor | |||
| 3706 | M | M.EcoW102ORF22410P (100% identity) | GATC | M.Eco13167ORF3706P |
| 3707 | CPS-53 (KpLE1) prophage protein | |||
| 4146 | Uncharacterised protein | |||
| 4147 | M | M.SenXORF20255P (99% identity) | RCCGGY | M.Eco13167ORF4147P |
| 4148 | R | Esp013ORF2745P (99% identity) | RCCGGY | Eco13167ORF4147P |
| 4149 | ATP-dependent endonuclease (OLD family | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3789 | copper efflux HTH-type transcriptional regulator | |||
| 3790 | M | M.SenC6482ORF1287P (100% identity) | M.Eco13167ORF3790P | |
| 3791 | R | SenLASSORF19350P (100% identity) | Eco13167ORF3790P | |
| 3792 | IS1 transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4104 | IS1 transposase | |||
| 4105 | R | Eco11123GmrSDP (100% identity) | Eco13167GmrSDP | |
| 4106 | protein YjiS | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4568 | Uncharacterised protein | |||
| 4569 | M | M.EcoNW114ORF23005P (98% identity) | M.Eco13167ORF4569P | |
| 4570 | Uncharacterised protein | |||