Escherichia coli NCTC11341 |
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Putative Escherichia coli NCTC11341 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,388,597 bp
GenBank #: UGBT00000000 (NZ_UGBT00000000)
REBASE acronym: Eco11341
Org_num: 43717
All begin NCTC11341_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3200 | transposase ORF B, IS1 | |||
| ??? | S | S.Sbo80ORF21375P (98% identity) | S.Eco11341ORF3202P | |
| ??? | M | M.Sbo80ORF21375P (87% identity) | M.Eco11341ORF3202P | |
| 3205 | restriction methylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1842 | DNA-binding protein Fis | |||
| 1843 | M | M.Sbo80ORF15755P (100% identity) | ATGCAT | M.Eco11341ORF1843P |
| 1844 | membrane protein | |||
| 1979 | ribulose-phosphate 3-epimerase | |||
| ??? | M | M.ObaBiBDamP (55% identity) | GATC | M.Eco11341DamP |
| 1982 | DamX protein | |||
| 3208 | McrC family protein, McrBC 5-methylcytosine | |||
| 3209 | R | SflFF17ORF19275P (100% identity) | Eco11341ORF3209P | |
| 3210 | endonuclease | |||
| 3327 | Uncharacterised protein | |||
| 3328 | M | M.Sso63633ORF22290P (100% identity) | M.Eco11341ORF3328P | |
| 3329 | phage lysis protein | |||
| 4532 | TraR/DksA family transcriptional regulator | |||
| 4533 | M | M.EcoSCU306ORF6255P (100% identity) | GATC | M.Eco11341ORF4533P |
| 4534 | replication protein for prophage | |||
| 6175 | Uncharacterised protein | |||
| 6176 | M | M.Eco10361ORF383P (99% identity) | M.Eco11341ORF6176P | |
| 6177 | phage protein | |||
| 6291 | DMT superfamily transporter inner | |||
| 6292 | V | V.SsoSE61DcmP (100% identity) | V.Eco11341DcmP | |
| 6293 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco11341DcmP |
| 6294 | phosphohydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3206 | Uncharacterised protein | |||
| 3207 | R | EcoS941McrBP (100% identity) | Eco11341McrBP | |
| 3208 | R | Sbo80McrCP (100% identity) | Eco11341McrCP | |
| 3209 | restriction endonuclease | |||