Escherichia coli NCTC11120 |
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Putative Escherichia coli NCTC11120 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,320,442 bp
GenBank #: UGBR00000000 (NZ_UGBR00000000)
REBASE acronym: Eco11120
Org_num: 43704
All begin NCTC11120_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5122 | restriction methylase | |||
| 5123 | M | M.EcoDCE7ORF18445P (100% identity) | TTANNNNNNRTCC | M.Eco11120I |
| 5124 | S | S.EcoDCE7ORF18445P (100% identity) | TTANNNNNNRTCC | S.Eco11120I |
| 5125 | R | EcoDCE7ORF18445P (100% identity) | TTANNNNNNRTCC | Eco11120IP |
| 5126 | DNA primase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 144 | recombination associated protein | |||
| 145 | M | M.Sen9102ORF23126P (99% identity) | M.Eco11120ORF145P | |
| 148 | Uncharacterised protein | |||
| 753 | DamX protein | |||
| 754 | M | M.Eco8621DamP (100% identity) | GATC | M.Eco11120DamP |
| 755 | ribulose-phosphate 3-epimerase | |||
| 866 | membrane protein | |||
| 867 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.Eco11120ORF867P |
| 868 | DNA-binding protein Fis | |||
| 2024 | CPS-53 (KpLE1) prophage protein | |||
| 2025 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eco11120ORF2025P |
| 2026 | LexA repressor | |||
| 2034 | lipoprotein | |||
| 2035 | M | M.SflLIN17ORF17405P (99% identity) | M.Eco11120ORF2035P | |
| 2036 | transmembrane phage holin | |||
| 2584 | phosphohydrolase | |||
| 2585 | M | M.EcoDCE7DcmP (99% identity) | CCWGG | M.Eco11120DcmP |
| 2586 | V | V.EcoSC477DcmP (100% identity) | V.Eco11120DcmP | |
| 2587 | DMT superfamily transporter inner | |||
| 3547 | anti-adapter protein IraM | |||
| 3551 | M | M.EcoS7438ORFNP (100% identity) | M.Eco11120ORF3551P | |
| 3552 | lipoprotein | |||
| 3996 | replication protein for prophage | |||
| 3997 | M | M.Eco941ORF6380P (100% identity) | GATC | M.Eco11120ORF3997P |
| 3998 | TraR/DksA family transcriptional regulator | |||
| 4664 | Flagellar basal-body P-ring formation protein | |||
| ??? | M | M.Eco8621ORF4119P (100% identity) | M.Eco11120ORF4665P | |
| 4666 | R | EcoS7438ORFEP (100% identity) | Eco11120ORF4665P | |
| 4667 | lateral flagellar anti-sigma factor 28 protein | |||
| 5024 | transposase InsG for insertion sequence element | |||
| 5025 | M | M.Eal26ORF20395P (100% identity) | M.Eco11120ORF5025P | |
| 5026 | Uncharacterised protein | |||
| 5116 | endonuclease | |||
| ??? | R | EcoC84497ORFJP (93% identity) | Eco11120ORF5117P | |
| 5119 | McrC family protein, McrBC 5-methylcytosine | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5118 | restriction endonuclease | |||
| 5119 | R | Eco8621McrCP (99% identity) | Eco11120McrCP | |
| 5120 | R | EcoDEC12BMcrBP (83% identity) | Eco11120McrBP | |
| 5121 | Uncharacterised protein | |||