Escherichia coli NCTC11118 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli NCTC11118 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,172,576 bp
GenBank #: UGAX00000000 (NZ_UGAX00000000)
REBASE acronym: Eco11118
Org_num: 43702
All begin NCTC11118_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4322 | Protein of uncharacterised function, DUF600 | |||
| 4323 | R | Ecos641ORF2625P (100% identity) | GGANNNNNNCTTC | Eco11118IP |
| 4324 | M | M.Ecos641ORF2625P (100% identity) | GGANNNNNNCTTC | M.Eco11118I |
| 4325 | S | S.EcoC9114I (100% identity) | GGANNNNNNCTTC | S.Eco11118I |
| 4326 | Uncharacterized conserved protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5048 | YfdA | |||
| ??? | M | M.EcoN04AORF145P (100% identity) | SAY | M.Eco11118ORF5049P |
| 5050 | cytoplasmic protein | |||
| 397 | DamX protein | |||
| 398 | M | M.EcoSCU316DamP (100% identity) | GATC | M.Eco11118DamP |
| 399 | ribulose-phosphate 3-epimerase | |||
| 506 | membrane protein | |||
| 507 | M | M.SdyFF51ORF20390P (100% identity) | ATGCAT | M.Eco11118ORF507P |
| 508 | DNA-binding protein Fis | |||
| 1919 | phosphohydrolase | |||
| 1920 | M | M.EcoC9114DcmP (100% identity) | CCWGG | M.Eco11118DcmP |
| 1921 | V | V.SsoSE61DcmP (100% identity) | V.Eco11118DcmP | |
| 1922 | DMT superfamily transporter inner | |||
| 2736 | phage protein | |||
| 2742 | M | M.SsoCS14ORF10750P (100% identity) | A | M.Eco11118ORF2742P |
| 2743 | lipoprotein | |||
| 3373 | protein ninx | |||
| 3374 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco11118ORF3374P |
| 3375 | recombination protein ninB from phage origin | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 73 | DNA-directed RNA polymerase, beta subunit/140 kD | |||
| 74 | R | Kpn0718McrBP (100% identity) | Eco11118McrBP | |
| 75 | R | EcoSF10McrCP (100% identity) | Eco11118McrCP | |
| 77 | Sucrose operon repressor | |||