Escherichia coli NCTC11101 |
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Putative Escherichia coli NCTC11101 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,091,851 bp
GenBank #: UGAO00000000 (NZ_UGAO00000000)
REBASE acronym: Eco11101
Org_num: 43690
All begin NCTC11101_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1055 | oxidoreductase | |||
| 1057 | R | EcosA33IP (100% identity) | GAGNNNNNNGTC | Eco11101IIP |
| 1058 | S | S.EcosA4I (100% identity) | GAGNNNNNNGTC | S.Eco11101II |
| 1059 | M | M.EcosA4I (100% identity) | GAGNNNNNNGTC | M.Eco11101II |
| 1060 | restriction methylase | |||
| 1110 | protein YjiS | |||
| 1112 | R | EcosA4IIP (100% identity) | GATANNNNNNTCC | Eco11101IP |
| 1113 | S | S.EcosA4II (100% identity) | GATANNNNNNTCC | S.Eco11101I |
| 1114 | M | M.EcosA4II (100% identity) | GATANNNNNNTCC | M.Eco11101I |
| 1115 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4858 | YfdA | |||
| 4859 | M | M.EcoYL3ORF24820P (99% identity) | SAY | M.Eco11101ORF4859P |
| 4860 | cytoplasmic protein | |||
| 337 | DamX protein | |||
| 338 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco11101DamP |
| 339 | ribulose-phosphate 3-epimerase | |||
| 630 | Replication gene A protein (GpA) | |||
| 631 | M | M.SspS13ORF1655P (100% identity) | M.Eco11101ORF631P | |
| 632 | R | SspS13ORF1655P (100% identity) | Eco11101ORF631P | |
| 633 | Uncharacterized conserved protein | |||
| 1062 | McrC family protein, McrBC 5-methylcytosine | |||
| 1063 | R | EcosA4ORF22115P (100% identity) | Eco11101ORF1063P | |
| 1064 | YjhS protein | |||
| 1164 | CPS-53 (KpLE1) prophage protein | |||
| 1165 | M | M.EcosA33ORF3820P (100% identity) | GATC | M.Eco11101ORF1165P |
| 1166 | LexA repressor | |||
| 2072 | TraR/DksA family transcriptional regulator | |||
| 2073 | M | M.EcoZ01ORF1668P (100% identity) | GATC | M.Eco11101ORF2073P |
| 2074 | replication protein for prophage | |||
| 3258 | DMT superfamily transporter inner | |||
| 3259 | V | V.EcosA4DcmP (100% identity) | V.Eco11101DcmP | |
| 3260 | M | M.EcosA33DcmP (100% identity) | CCWGG | M.Eco11101DcmP |
| 3261 | phosphohydrolase | |||
| 4747 | DNA-binding protein Fis | |||
| 4748 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco11101ORF4748P |
| 4749 | membrane protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1060 | restriction methylase | |||
| 1061 | R | EcosA4McrBP (100% identity) | Eco11101McrBP | |
| 1062 | R | EcoTE113McrCP (79% identity) | Eco11101McrCP | |
| 1063 | restriction endonuclease | |||