Escherichia coli NCTC10957 |
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Putative Escherichia coli NCTC10957 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,280,945 bp
GenBank #: UGFJ00000000 (NZ_UGFJ00000000)
REBASE acronym: Eco10957
Org_num: 43682
All begin NCTC10957_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4484 | Uncharacterized conserved protein | |||
| 4485 | R | EcosLF82ORF3455P (100% identity) | GAGNNNNNNNATGC | Eco10957IP |
| 4486 | M | M.EcoAPEC2ORF17845P (100% identity) | GAGNNNNNNNATGC | M.Eco10957I |
| 4487 | S | S.EcoBP231ORF18960P (72% identity) | GAGNNNNNNNATGC | S1.Eco10957I |
| 4488 | S | S.EcoPnTigI (18% identity) | S2.Eco10957IP | |
| 4490 | Uncharacterized conserved protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 305 | Uncharacterised protein | |||
| 306 | M | M.YpsF1ORFCP (100% identity) | M.Eco10957ORF306P | |
| 307 | nuclease | |||
| 381 | Uncharacterised protein | |||
| 382 | M | M.YpsF1ORFBP (100% identity) | M.Eco10957ORF382P | |
| 383 | Spermidine synthase | |||
| 410 | DNA-binding plasmid partitioning protein | |||
| 411 | M | M.YpsF1ORFDP (95% identity) | M.Eco10957ORF411P | |
| 412 | Uncharacterised protein | |||
| 791 | DamX protein | |||
| 792 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco10957DamP |
| 793 | ribulose-phosphate 3-epimerase | |||
| 916 | membrane protein | |||
| 917 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco10957ORF917P |
| 918 | DNA-binding protein Fis | |||
| 1688 | CPS-53 (KpLE1) prophage protein | |||
| 1689 | M | M.EfeC23ORF5755P (100% identity) | GATC | M.Eco10957ORF1689P |
| 1690 | LexA repressor | |||
| 1727 | Uncharacterised protein | |||
| ??? | M | M.SflSTLE1ORF5615P (100% identity) | M.Eco10957ORF1728P | |
| 1729 | R | Sso8033ORF3755P (99% identity) | Eco10957ORF1728P | |
| 1730 | 121 aa hypothetical protein | |||
| 2441 | phosphohydrolase | |||
| 2442 | M | M.Ecos2ADcmP (100% identity) | CCWGG | M.Eco10957DcmP |
| 2443 | V | V.EcosC25DcmP (100% identity) | V.Eco10957DcmP | |
| 2444 | DMT superfamily transporter inner | |||
| 3190 | protein ninx | |||
| 3191 | M | M.EcoR11ORF20620P (100% identity) | GATC | M.Eco10957ORF3191P |
| 3192 | recombination protein ninB from phage origin | |||
| 4520 | YjhS protein | |||
| 4521 | R | Ecoi127aORF4076P (100% identity) | Eco10957ORF4521P | |
| 4522 | Uncharacterised protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 480 | DNA-directed RNA polymerase, beta subunit/140 kD | |||
| 481 | R | Kpn0718McrBP (100% identity) | Eco10957McrBP | |
| 482 | R | SflN97McrCP (100% identity) | Eco10957McrCP | |
| 484 | Sucrose operon repressor | |||
| 4488 | type I restriction enzyme EcoEI specificity | |||
| 4490 | R | EcoPnTigGmrSD2P (97% identity) | Eco10957GmrSDP | |
| 4491 | transposase YhgA-like protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3560 | replication protein for prophage | |||
| 3561 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco10957ORF3561P |
| 3562 | TraR/DksA family transcriptional regulator | |||