Clostridium perfringens NCTC10578 |
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Putative Clostridium perfringens NCTC10578 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 3,303,290 bp
GenBank #: UFXA00000000 (NZ_UFXA00000000)
REBASE acronym: Cpe10578
Org_num: 42968
All begin NCTC10578_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2611 | DNA repair ATPase | |||
| 2612 | R | Cpe1527aORF13015P (100% identity) | AGANNNNNNNTCNG | Cpe10578IP |
| 2613 | Uncharacterised protein | |||
| 2614 | Uncharacterised protein | |||
| 2615 | S | S.Cpe1527aORF13015P (100% identity) | AGANNNNNNNTCNG | S.Cpe10578I |
| 2616 | M | M.Cpe1527aORF13015P (100% identity) | AGANNNNNNNTCNG | M.Cpe10578I |
| 2617 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 177 | ABC transporter | |||
| ??? | M | M1.BssMII (69% identity) | GGGTC | M1.Cpe10578III |
| 179 | M | M2.BssMII (68% identity) | GGGTC | M2.Cpe10578III |
| 180 | Uncharacterised protein | |||
| 181 | R | BssIMIA (64% identity) | GGGTC | Cpe10578IIIP |
| 182 | RNA 2-phosphotransferase-like protein | |||
| 1495 | CRISPR-associated protein, Csn1 family | |||
| 1496 | RM | Cpe904ORF10185P (100% identity) | GANGAGY | Cpe10578V |
| 1497 | Uncharacterised protein | |||
| 1606 | DNA-binding protein | |||
| 1607 | R | CpeC216ORF7275P (100% identity) | CCWGG | Cpe10578IVP |
| 1608 | M | M.Cpe3842ORF9070P (100% identity) | CCWGG | M.Cpe10578IV |
| 1609 | IS1469, transposase | |||
| 2957 | methionine sulfoxide reductase A | |||
| 2958 | M | M.Cpe19ORFCP (99% identity) | GTATAC | M.Cpe10578II |
| 2959 | phage infection protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 985 | Uncharacterised protein | |||
| 986 | R | CpeS1McrBP (99% identity) | Cpe10578McrB2P | |
| 987 | R | Cpe17aMcrCP (96% identity) | Cpe10578McrC2P | |
| 988 | SdpI/YhfL protein family | |||
| 992 | CAAX amino terminal protease | |||
| 993 | R | Cpe77bMcrB2P (99% identity) | Cpe10578McrBP | |
| 994 | R | CpeS10McrCP (97% identity) | Cpe10578McrCP | |
| 995 | ATPase | |||
| 1013 | Uncharacterised protein | |||
| ??? | R | CboDB2ORF8740P (71% identity) | Cpe10578ORF1014P | |
| 1015 | competence protein-like protein | |||