Citrobacter youngae NCTC13708 |
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Putative Citrobacter youngae NCTC13708 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,975,888 bp
GenBank #: UFWE00000000 (NZ_UFWE00000000)
REBASE acronym: Cyo13708
Org_num: 42953
All begin NCTC13708_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4259 | Protein of uncharacterised function (DUF3296) | |||
| 4260 | M | M.Cpo157ORF4204P (99% identity) | GATGNNNNNCTG | M.Cyo13708I |
| 4261 | S | S.Cpo157ORF4204P (100% identity) | GATGNNNNNCTG | S.Cyo13708I |
| 4262 | R | Cfr112ORF4341P (99% identity) | GATGNNNNNCTG | Cyo13708IP |
| 4263 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 484 | DamX protein | |||
| 485 | M | M.CyoCF10DamP (100% identity) | GATC | M.Cyo13708DamP |
| 486 | ribulose-phosphate 3-epimerase | |||
| 583 | Protein of uncharacterised function (DUF2556) | |||
| 584 | M | M.CyoCF10ORF2305P (99% identity) | ATGCAT | M.Cyo13708II |
| 585 | DNA-binding protein Fis | |||
| 925 | Uncharacterised protein | |||
| 926 | R | R2.CspLY1ORF4005P (98% identity) | R2.Cyo13708ORF931P | |
| 927 | R | R1.Esp15C17ORF2680P (97% identity) | R1.Cyo13708ORF931P | |
| 928 | ISCro1 transposase C | |||
| 929 | ISCro1 transposase B | |||
| 930 | ISCro1 transposase A | |||
| 931 | M | M.Esp15C17ORF2680P (98% identity) | M.Cyo13708ORF931P | |
| 932 | Uncharacterised protein | |||
| 1378 | Uncharacterised protein | |||
| 1379 | M | M.CbrSOC04ORF12980P (96% identity) | M.Cyo13708ORF1379P | |
| 1380 | Uncharacterised protein | |||
| 1398 | Bacteriophage Lambda NinG protein | |||
| 1399 | M | M1.Csp887ORF6215P (95% identity) | M1.Cyo13708ORF1399P | |
| 1400 | Phage antitermination protein Q | |||
| 1401 | Uncharacterised protein | |||
| 1402 | M | M2.Csp887ORF6215P (97% identity) | M2.Cyo13708ORF1399P | |
| 1403 | Uncharacterised protein | |||
| 1947 | Bacterial protein of uncharacterised function | |||
| 1948 | M | M.Eas516ORF8680P (74% identity) | CTGCAG | M.Cyo13708III |
| 1949 | Protein of uncharacterised function DUF262 | |||
| 1996 | phosphohydrolase | |||
| ??? | M | M.Cyo13709ORF1821P (99% identity) | CCWGG | M.Cyo13708ORF1997P |
| 1998 | V | V.Cyo13709ORF1821P (99% identity) | V.Cyo13708ORF1997P | |
| 1999 | amino acid metabolite efflux | |||
| 3166 | Uncharacterised protein | |||
| ??? | M | M.CbrF418ORF10575P (83% identity) | M.Cyo13708ORF3167P | |
| 3169 | methyltransferase | |||
| 3168 | prophage DNA adenine methylase | |||
| 3169 | M | M.CspC21ORF16135P (98% identity) | M.Cyo13708ORF3169P | |
| 3170 | Uncharacterised protein | |||
| 4242 | Protein of uncharacterised function (DUF1493) | |||
| 4243 | R | Cfr8782ORF861P (98% identity) | Cyo13708ORF4243P | |
| 4244 | Restriction endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1286 | Uncharacterised protein | |||
| 1287 | R | Kqu069McrCP (93% identity) | Cyo13708McrCP | |
| 1288 | R | Kqu069McrBP (99% identity) | Cyo13708McrBP | |
| 1289 | Uncharacterised protein | |||