Campylobacter helveticus NCTC12470 |
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Putative Campylobacter helveticus NCTC12470 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 1,890,908 bp
GenBank #: UIGN00000000 (NZ_UIGN00000000)
REBASE acronym: Che12470
Org_num: 42900
All begin NCTC12470_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 764 | 3-deoxy-D-arabino-heptulosonate 7-phosphate | |||
| 765 | M | M.Che51209VI (100% identity) | ATCNNNNNNCTC | M.Che12470VI |
| 766 | S | S.Che51209VI (100% identity) | ATCNNNNNNCTC | S.Che12470VI |
| 767 | R | Che51209VIP (100% identity) | ATCNNNNNNCTC | Che12470VIP |
| 768 | UDP-N-acetylmuramate--L-alanine ligase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 31 | N-acetyl-gamma-glutamyl-phosphate reductase | |||
| 32 | R | Che51209ORF18P (100% identity) | Che12470ORF33P | |
| 33 | M | M1.Che51209ORF18P (100% identity) | M1.Che12470ORF33P | |
| 34 | M | M2.Che51209ORF18P (100% identity) | M2.Che12470ORF33P | |
| 35 | D12 class N6 adenine-specific DNA | |||
| 34 | D12-class N6-adenine-specific DNA | |||
| 35 | M | M.Che51209III (100% identity) | RAATTY | M.Che12470I |
| ??? | R | Che51209IIIP (100% identity) | RAATTY | Che12470IP |
| 38 | DNA topoisomerase I | |||
| 91 | periplasmic protein TonB | |||
| 92 | M | M.Che9613ORF6510P (96% identity) | M.Che12470ORF92P | |
| 93 | Uncharacterised protein | |||
| 149 | Molybdenum cofactor biosynthesis protein MoaD | |||
| 150 | R | Che51209VIIP (100% identity) | GGNCC | Che12470IVP |
| 151 | M | M.Che51209VII (100% identity) | GGNCC | M.Che12470IV |
| 152 | oxidoreductase | |||
| 272 | imidazole glycerol-phosphate | |||
| 273 | M | M.Che51209I (100% identity) | GATC | M.Che12470ORF273P |
| 274 | R | Che51209IP (100% identity) | GATC | Che12470ORF273P |
| 275 | Imidazole glycerol phosphate synthase | |||
| 335 | LSU ribosomal protein L9p | |||
| ??? | RM | Che51209ORF317P (100% identity) | Che12470ORF336P | |
| 337 | S | Che51209ORF317P (16% identity) | S.Che12470ORF336P | |
| 338 | ATP-dependent protease HslV | |||
| 411 | GMP synthase | |||
| ??? | R | Che51209ORF392P (72% identity) | Che12470ORF413P | |
| 413 | M | M.Che9613ORF4880P (100% identity) | M.Che12470ORF413P | |
| 414 | DNA polymerase I | |||
| 867 | membrane protein | |||
| ??? | M | M.Che51209ORF832P (100% identity) | M.Che12470ORF868P | |
| 870 | Uncharacterized conserved protein | |||
| 919 | Uncharacterised protein | |||
| ??? | RM | Che51209ORF880P (99% identity) | Che12470ORF920P | |
| 922 | MATE efflux family protein | |||
| 961 | Uncharacterised protein | |||
| 962 | M | M.Che51209II (100% identity) | GANTC | M.Che12470III |
| 963 | R | Che51209IIP (100% identity) | GANTC | Che12470IIIP |
| 964 | molybdopterin-guanine dinucleotide biosynthesis | |||
| 976 | tRNA (uracil-5-)-methyltransferase | |||
| 977 | RM | Che51209ORF934P (100% identity) | Che12470ORF977P | |
| 978 | carbonic anyhydrase | |||
| 1289 | Uncharacterised protein | |||
| ??? | M | M.Che51209IV (98% identity) | ACNGT | M.Che12470II |
| 1291 | Uncharacterised protein | |||
| 1292 | RNA methylase family UPF0020 | |||
| 1293 | R | Che51209IVP (100% identity) | ACNGT | Che12470IIP |
| 1294 | Chorismate mutase I / Prephenate dehydratase | |||
| 1291 | Uncharacterised protein | |||
| 1292 | M | M.Che51209ORF1234P (100% identity) | M.Che12470ORF1292P | |
| 1293 | Uncharacterised protein | |||
| 1556 | Protein of uncharacterised function (DUF2920) | |||
| ??? | R | Che51209ORF1489P (99% identity) | Che12470ORF1558P | |
| 1558 | M | M.Che51209ORF1489P (100% identity) | M.Che12470ORF1558P | |
| 1559 | Thioredoxin | |||
| 1609 | peptide chain release factor 1 | |||
| 1610 | R | Che51209ORF1542P (100% identity) | Che12470ORF1611P | |
| 1611 | M | M1.Che51209ORF1542P (100% identity) | M1.Che12470ORF1611P | |
| ??? | M | M2.Che51209ORF1542P (100% identity) | M2.Che12470ORF1611P | |
| 1614 | formyltransferase | |||
| 1624 | glucose inhibited division protein B | |||
| ??? | RM | Che51209ORF1555P (100% identity) | Che12470ORF1625P | |
| 1628 | Biotin carboxylase of acetyl-CoA carboxylase | |||
| 1680 | Uncharacterised protein | |||
| ??? | M | M.Che51209V (96% identity) | CCGG | M.Che12470V |
| 1682 | GTP-binding protein Der | |||
| 1909 | ribosomal pseudouridine synthase | |||
| ??? | M | M1.Che51209ORF1825P (76% identity) | M1.Che12470ORF1910P | |
| 1911 | M | M2.Che51209ORF1825P (100% identity) | M2.Che12470ORF1910P | |
| 1912 | R | Che51209ORF1825P (100% identity) | Che12470ORF1910P | |
| 1913 | crossover junction endodeoxyribonuclease RuvC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 853 | Argininosuccinate synthase | |||
| 854 | R | Che51209ORF820P (100% identity) | Che12470ORF855P | |
| ??? | M | M.Che51209ORF820P (100% identity) | M.Che12470ORF855P | |
| 858 | Pyridoxine 5-phosphate synthase | |||
| 1848 | Na+/H+ antiporter family protein | |||
| 1849 | R | Che51209ORF1768P (100% identity) | Che12470ORF1850P | |
| 1850 | M | M.Che51209ORF1768P (100% identity) | M.Che12470ORF1850P | |
| 1851 | radical SAM domain protein | |||