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Putative Burkholderia oklahomensis NCTC13388 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 7,174,317 bp
GenBank #: UFUH00000000 (NZ_UFUH00000000)
REBASE acronym: Bok13388
Org_num: 42879
All begin NCTC13388_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1686 | Site-specific recombinase XerD | |||
1687 | R | BokCIP (93% identity) | CCACNNNNWTCA | Bok13388IIIP |
1688 | S | S.BokCI (100% identity) | CCACNNNNWTCA | S.Bok13388III |
1689 | M | M.BokCI (100% identity) | CCACNNNNWTCA | M.Bok13388III |
1690 | Uncharacterised protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
673 | Uncharacterised protein | |||
674 | M | M.BokCORFIP (41% identity) | M.Bok13388ORF674P | |
676 | Dehydrosqualene synthase | |||
5039 | Tryptophan synthase alpha chain | |||
5040 | M | M.BokEORFHP (87% identity) | GTWWAC | M.Bok13388II |
5041 | Tryptophan synthase beta chain | |||
2069 | Transposase and inactivated derivatives | |||
??? | V | V.BokCORFAP (100% identity) | V.Bok13388ORF2071P | |
2070 | R | BokCORFAP (100% identity) | Bok13388ORF2071P | |
2071 | M | M.BokCORFAP (100% identity) | M.Bok13388ORF2071P | |
2072 | Uncharacterised protein | |||
2304 | Phage P2 baseplate assembly protein gpV | |||
2305 | M | M.BokBDUORF3339P (93% identity) | M.Bok13388ORF2305P | |
2306 | Uncharacterised protein | |||
3522 | Uncharacterized copper-binding protein | |||
??? | M | M.BokCORFCP (100% identity) | M.Bok13388ORF3523P | |
3525 | Uncharacterised protein | |||
3634 | Uncharacterised protein | |||
??? | M | M.BokCORFGP (100% identity) | M.Bok13388ORF3636P | |
3637 | PUA domain (predicted RNA-binding domain) | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2209 | Outer membrane porin protein BP0840 precursor | |||
2210 | M | M.BokCORFBP (98% identity) | CACAG | M.Bok13388I |
2211 | R | BokCORFBP (100% identity) | CACAG | Bok13388IP |
2212 | Outer membrane porin protein BP0840 precursor |