Sinimarinibacterium species NLF-5-8 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Sinimarinibacterium species NLF-5-8 RM systems
Ref: Kim,D.H. and Kim,J.G. unpublished
REBASE ref # 29564
Complete sequence: 3,200,809 bp
GenBank #: CP048030
REBASE acronym: SspNLF58
Org_num: 38737
All begin GT972_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5460 | DUF262 domain-containing protein | |||
| 5465 | M | M.Ope1ORF3775P (91% identity) | M.SspNLF58ORF5465P | |
| 5470 | S | S.Aca16800ORFBP (51% identity) | S.SspNLF58ORF5465P | |
| 5475 | virulence RhuM family protein | |||
| 5480 | R | AdeK601ORF2051P (90% identity) | SspNLF58ORF5465P | |
| 5485 | recombinase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 680 | hydrolase TatD | |||
| 685 | RM | NbaT11ORF11340P (62% identity) | SspNLF58ORF685P | |
| 690 | HTTM domain-containing protein | |||
| 2445 | prepilin-type N-terminal cleavage/methylation | |||
| 2450 | RM | Ppn32ORF25295P (91% identity) | SspNLF58ORF2450P | |
| 2455 | DUF4942 domain-containing protein | |||
| 2465 | phage Gp37/Gp68 family protein | |||
| 2470 | M | M.AmeR5022ORF22860P (68% identity) | M.SspNLF58ORF2470P | |
| 2475 | type II secretion system protein | |||
| 2590 | 136 aa hypothetical protein | |||
| 2595 | M | M.Mwh3033ORFIP (43% identity) | M.SspNLF58ORF2595P | |
| 2600 | 60 aa hypothetical protein | |||
| 12675 | CopG family transcriptional regulator | |||
| 12680 | M | M.PaeT2436ORF15955P (85% identity) | M.SspNLF58ORF12680P | |
| 12685 | R | SspA1ORFGP (89% identity) | SspNLF58ORF12680P | |
| 12690 | stem cell self-renewal protein Piwi | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12800 | formate-dependent phosphoribosylglycinamide | |||
| 12805 | R | PaeF078ORF6215P (93% identity) | SspNLF58ORF12815P | |
| 12810 | Fic family protein | |||
| 12815 | M | M.Rsp115ORF18797P (44% identity) | M.SspNLF58ORF12815P | |
| 12820 | IS3 family transposase | |||