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Putative Escherichia coli STEC309 RM systems
Ref: Yang,X. et al. Int. J. Med. Microbiol. 310 (1), 151377 (2020)
REBASE ref # 29793
Sequence length: | GenBank #: | |
Chromosome: | 4,917,238 bp | CP041435 |
plasmid pSTEC309: | 88,727 bp | CP041436 |
REBASE acronym: EcoC309
Org_num: 38086
All begin FNE81_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
20940 | IS3 family transposase | |||
20945 | M | M.SsoSE61ORF6540P (79% identity) | GACNNNNNNRTAAY | M.EcoC309ORF20945P |
20950 | S | S.EcoWP2ORF38380P (99% identity) | GACNNNNNNRTAAY | S.EcoC309ORF20945P |
20955 | R | SflFF22ORF2075P (100% identity) | GACNNNNNNRTAAY | EcoC309ORF20945P |
20965 | NADPH-dependent aldehyde reductase Ahr | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1745 | cell division protein DamX | |||
1750 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC309DamP |
1755 | ribulose-phosphate 3-epimerase | |||
2310 | DUF2556 domain-containing protein | |||
2315 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoC309ORF2315P |
2320 | DNA-binding transcriptional regulator Fis | |||
9345 | phosphohydrolase | |||
9350 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoC309DcmP |
9355 | V | V.SsoSE61DcmP (100% identity) | V.EcoC309DcmP | |
9360 | drug/metabolite exporter YedA | |||
15410 | replication endonuclease | |||
15415 | M | M.KpnRKPORF17480P (100% identity) | GATC | M.EcoC309ORF15415P |
15420 | TraR/DksA family transcriptional regulator | |||
16080 | NinE family protein | |||
16085 | M | M.Efe1521ORF4420P (99% identity) | GATC | M.EcoC309ORF16085P |
16090 | recombination protein NinB | |||
17495 | DUF1317 family protein | |||
17500 | M | M.Eco14723ORF6580P (100% identity) | M.EcoC309ORF17500P | |
17505 | 93 aa hypothetical protein | |||
18970 | LexA family transcriptional regulator | |||
18975 | M | M.EcoK12PORFFP (100% identity) | GATC | M.EcoC309ORF18975P |
18980 | PerC family transcriptional regulator | |||
22350 | LexA family transcriptional regulator | |||
22355 | M | M.EcoEC0362ORF5955P (93% identity) | M.EcoC309ORF22355P | |
22360 | PerC family transcriptional regulator | |||
plasmid pSTEC309 | ||||
24655 | 73 aa hypothetical protein | |||
24660 | M | M.EcoWY5172ORF23370P (100% identity) | M.EcoC309ORF24660P | |
24665 | 102 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
310 | DNA damage-inducible protein D | |||
315 | R | EcoY2019ORF14655P (100% identity) | EcoC309ORF320P | |
320 | M | M.EcoY2019ORF14655P (100% identity) | M.EcoC309ORF320P | |
325 | DUF262 domain-containing protein |