Escherichia coli NCCP 14540 |
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Putative Escherichia coli NCCP 14540 RM systems
Ref: Yu,W.S. et al. unpublished
REBASE ref # 29691
Complete sequence: 5,538,597 bp
GenBank #: CP042982
REBASE acronym: Eco14540
Org_num: 37696
All begin FOV73_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2470 | 322 aa hypothetical protein | |||
| ??? | R | EcosLF82ORF3455P (100% identity) | TACNNNNNNNRTRTC | Eco14540ORF2490P |
| 2490 | M | M.EcoSTEC508ORF24455P (100% identity) | TACNNNNNNNRTRTC | M.Eco14540ORF2490P |
| 2495 | S | S.EcoSTEC508ORF24455P (100% identity) | TACNNNNNNNRTRTC | S.Eco14540ORF2490P |
| 2500 | endoribonuclease SymE | |||
| 6885 | 65 aa hypothetical protein | |||
| 6890 | R | Ecoi012ORF18325P (99% identity) | TGANNNNNNCTTC | Eco14540ORF6895P |
| 6895 | M | M.EcoW087ORF21705P (100% identity) | TGANNNNNNCTTC | M.Eco14540ORF6895P |
| 6900 | S | S.EcoW087ORF21705P (100% identity) | TGANNNNNNCTTC | S.Eco14540ORF6895P |
| 6905 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8435 | cell division protein DamX | |||
| 8440 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco14540DamP |
| 8445 | ribulose-phosphate 3-epimerase | |||
| 9000 | DUF2556 domain-containing protein | |||
| 9005 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco14540ORF9005P |
| 9010 | DNA-binding transcriptional regulator Fis | |||
| 12595 | PerC family transcriptional regulator | |||
| 12600 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco14540ORF12600P |
| 12605 | LexA family transcriptional regulator | |||
| 15195 | recombination protein NinB | |||
| 15200 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco14540ORF15200P |
| 15205 | NinE family protein | |||
| 17035 | HD domain-containing protein | |||
| 17040 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco14540DcmP |
| 17045 | V | V.SflSTLE3DcmP (100% identity) | V.Eco14540DcmP | |
| 17050 | drug/metabolite exporter YedA | |||
| 18550 | recombination protein NinB | |||
| 18555 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco14540ORF18555P |
| 18560 | NinE family protein | |||
| 23450 | 108 aa hypothetical protein | |||
| 23465 | M | M.EcoMBT5ORF5965P (100% identity) | M.Eco14540ORF23465P | |
| 23470 | TrmB family transcriptional regulator | |||