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Putative Glaesserella parasuis GZ20170512 RM systems
Ref: Yan,H. et al. unpublished
REBASE ref # 29709
Complete sequence: 2,266,893 bp
GenBank #: CP029150
REBASE acronym: Gpa70512
Org_num: 37740
All begin C3363_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
5175 | 3-phosphoserine/phosphohydroxythreonine | |||
5180 | M | M.GpaXP11ORF3145P (99% identity) | M.Gpa70512ORF5180P | |
5185 | S | S.Hpa33ORF7204P (100% identity) | S.Gpa70512ORF5180P | |
5190 | R | Hpa33ORF7204P (99% identity) | Gpa70512ORF5180P | |
5195 | histidinol-phosphate transaminase | |||
6810 | apolipoprotein N-acyltransferase | |||
6815 | R | Hpa33ORF6320P (100% identity) | Gpa70512ORF6830P | |
6820 | anticodon nuclease | |||
6825 | S | S.Hpa33ORF6320P (99% identity) | S.Gpa70512ORF6830P | |
6830 | M | M.HpaMNHORF509P (100% identity) | M.Gpa70512ORF6830P | |
6835 | RNA polymerase sigma factor RpoE | |||
10650 | 101 aa hypothetical protein | |||
10655 | R | HpaMNHORF1257P (100% identity) | Gpa70512ORF10680P | |
10660 | 145 aa hypothetical protein | |||
10665 | DUF1829 domain-containing protein | |||
10670 | S | S.Gpa104ORFQP (49% identity) | S.Gpa70512ORF10680P | |
10675 | anticodon nuclease | |||
10680 | M | M.Hpa33ORF5528P (99% identity) | M.Gpa70512ORF10680P | |
10685 | transposase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1200 | restriction endonuclease subunit M | |||
1205 | S | S.Gpa104ORFOP (98% identity) | S.Gpa70512ORF1215P | |
1210 | R | HpaSH03ORF4035P (99% identity) | Gpa70512ORF1215P | |
1215 | M | M.HpaSHORF1954P (100% identity) | M.Gpa70512ORF1215P | |
1220 | M48 family peptidase | |||
2295 | 2-hydroxyacid dehydrogenase | |||
2300 | R | HpaST41ORF8905P (100% identity) | Gpa70512ORF2305P | |
2305 | M | M.HpaST41ORF8905P (100% identity) | M.Gpa70512ORF2305P | |
2310 | flavodoxin-dependent | |||
2810 | 86 aa hypothetical protein | |||
2815 | M | M.Gpa1818ORF5330P (100% identity) | M.Gpa70512ORF2815P | |
2820 | enoyl-CoA hydratase | |||
3345 | sodium-dependent transporter | |||
3350 | M | M.HpaST41ORF8035P (100% identity) | GATC | M.Gpa70512ORF3350P |
3355 | 3-dehydroquinate synthase | |||
4750 | chromosome partition protein MukE | |||
4755 | M | M.Gpa1818ORF5375P (100% identity) | M.Gpa70512ORF4755P | |
4760 | 199 aa hypothetical protein | |||
5440 | M48 family peptidase | |||
??? | M | M.HpaSW140ORF1138P (55% identity) | M.Gpa70512ORF5445P | |
5450 | HNH endonuclease | |||
5445 | modification methylase | |||
5450 | R | HpaSH03ORF4035P (80% identity) | Gpa70512ORF5450P | |
5455 | S | S.Hpa33ORF10915P (80% identity) | S.Gpa70512ORF5450P | |
5460 | restriction endonuclease subunit M | |||
6395 | 547 aa hypothetical protein | |||
6400 | M | M.HpaSHORF629P (100% identity) | M.Gpa70512ORF6400P | |
6405 | addiction module antidote protein | |||
7790 | 125 aa hypothetical protein | |||
7795 | M | M.Gpa104ORFIP (92% identity) | M.Gpa70512ORF7795P | |
7800 | aspartate-semialdehyde dehydrogenase | |||
10420 | cell filamentation protein Fic | |||
10425 | S | S1.Gpa104ORFGP (68% identity) | S.Gpa70512ORF10430P | |
10430 | RM | Hpa33ORF5785P (100% identity) | Gpa70512ORF10430P | |
10435 | DUF4143 domain-containing protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2485 | beta-ketoacyl-ACP synthase I | |||
2490 | R | Hpa33ORFAP (100% identity) | Gpa70512ORF2495P | |
2495 | M | M.Gpa1808ORF2455P (98% identity) | M.Gpa70512ORF2495P | |
2500 | DUF4391 domain-containing protein | |||
9775 | Fic family protein | |||
9780 | R | Hpa33ORFBP (100% identity) | Gpa70512ORF9785P | |
9785 | M | M2.Hpa33ORFBP (100% identity) | M.Gpa70512ORF9785P | |
9790 | restriction endonuclease subunit M | |||
10100 | DUF4143 domain-containing protein | |||
10105 | M | M.HpaSHORF1827P (83% identity) | M.Gpa70512ORF10105P | |
10110 | R | GpaH80ORF9040P (99% identity) | Gpa70512ORF10105P | |
10115 | transcriptional regulator |