Clostridioides difficile 20691 |
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Putative Clostridioides difficile 20691 RM systems
Ref: Oliveira,P.H. et al. unpublished
REBASE ref # 29046
Contig set: 4,244,455 bp
GenBank #: PZRM00000000 (NZ_PZRM00000000)
REBASE acronym: Cdi20691
Org_num: 36159
All begin DA435_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3885 | 115 aa hypothetical protein | |||
| 3890 | M | M.CdiS122ORF3110P (100% identity) | ATTYNNNNNCTTC | M.Cdi20691ORF3890P |
| 3895 | S | S.Pdi30ORF18845P (100% identity) | ATTYNNNNNCTTC | S.Cdi20691ORF3890P |
| 3900 | 423 aa hypothetical protein | |||
| 3905 | R | Pdi30ORF18845P (100% identity) | ATTYNNNNNCTTC | Cdi20691ORF3890P |
| 3910 | 111 aa hypothetical protein | |||
| 4430 | ketose-bisphosphate aldolase | |||
| 4435 | M | M.Pdi30ORF18320P (100% identity) | TAGNNNNNRTGAA | M.Cdi20691ORF4435P |
| 4440 | S | S.Pdi30ORF18320P (100% identity) | TAGNNNNNRTGAA | S.Cdi20691ORF4435P |
| 4445 | 102 aa hypothetical protein | |||
| 4450 | nucleotidyltransferase domain-containing | |||
| 4455 | 142 aa hypothetical protein | |||
| 4460 | R | CdiS122ORF2565P (100% identity) | TAGNNNNNRTGAA | Cdi20691ORF4435P |
| 4465 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3970 | recombinase family protein | |||
| 3975 | M | M2.Pdi30ORF18765P (100% identity) | CATCG | M1.Cdi20691ORF3975P |
| 3980 | M | M1.Pdi30ORF18765P (100% identity) | CATCG | M2.Cdi20691ORF3975P |
| 3985 | 383 aa hypothetical protein | |||
| 4060 | 872 aa hypothetical protein | |||
| 4065 | M | M.Pdi6602ORF710333P (100% identity) | GCNGC | M.Cdi20691ORF4065P |
| 4070 | class B sortase | |||
| 5745 | Rrf2 family transcriptional regulator | |||
| 5750 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi20691I |
| 5755 | patatin-like phospholipase family protein | |||
| 15035 | 69 aa hypothetical protein | |||
| 15040 | M | M.PdiZ31ORF1645P (100% identity) | M.Cdi20691ORF15040P | |
| 15045 | 111 aa hypothetical protein | |||
| 19265 | 73 aa hypothetical protein | |||
| 19270 | M | M.Pdi30ORF7740P (100% identity) | M.Cdi20691ORF19270P | |
| 19275 | 38 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9475 | cell division protein | |||
| 9480 | R | Pdi30McrBP (100% identity) | Cdi20691McrBP | |
| 9485 | R | Pdi30McrCP (100% identity) | Cdi20691McrCP | |
| 9490 | AAA family ATPase | |||