Clostridioides difficile 20479 |
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Putative Clostridioides difficile 20479 RM systems
Ref: Oliveira,P.H. et al. unpublished
REBASE ref # 29046
Contig set: 4,167,354 bp
GenBank #: PZRG00000000 (NZ_PZRG00000000)
REBASE acronym: Cdi20479
Org_num: 36153
All begin DA425_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16130 | DUF262 domain-containing protein | |||
| 16135 | R | Cdi21305IIP (98% identity) | TAAANNNNGRTG | Cdi20479ORF16160P |
| 16140 | 142 aa hypothetical protein | |||
| 16145 | nucleotidyltransferase domain-containing | |||
| 16150 | 102 aa hypothetical protein | |||
| 16155 | S | S.Cdi21305II (100% identity) | TAAANNNNGRTG | S.Cdi20479ORF16160P |
| 16160 | M | M.Pdi30ORF18320P (100% identity) | TAAANNNNGRTG | M.Cdi20479ORF16160P |
| 16165 | ketose-bisphosphate aldolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14835 | patatin-like phospholipase family protein | |||
| 14840 | M | M.CdiEW15I (100% identity) | CAAAAA | M.Cdi20479ORF14840P |
| 14845 | Rrf2 family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16615 | 41 aa hypothetical protein | |||
| 16620 | R | Cdi21305IIIP (100% identity) | TAACTG | Cdi20479ORF16625P |
| 16625 | M | M.Cdi21305III (100% identity) | TAACTG | M.Cdi20479ORF16625P |
| 16630 | 115 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11385 | AAA family ATPase | |||
| 11390 | R | Pdi6602McrCP (100% identity) | Cdi20479McrCP | |
| 11395 | R | CdiM161McrBP (100% identity) | Cdi20479McrBP | |
| 11400 | cell division protein | |||