Shigella sonnei AUSMDU00010534 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Shigella sonnei AUSMDU00010534 RM systems
Ref: Baines,S.L. et al. unpublished
REBASE ref # 29032
| Sequence length: | GenBank #: | |
| Chromosome: | 4,837,733 bp | CP045932 |
| plasmid pAUSMDU00010534_01: | 108,107 bp | CP045933 |
| plasmid pAUSMDU00010534_02: | 80,987 bp | CP045934 |
REBASE acronym: Sso10534
Org_num: 36549
All begin GJE15_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 700 | cell division protein DamX | |||
| 705 | M | M.SsoST152DamP (100% identity) | GATC | M.Sso10534DamP |
| 710 | ribulose-phosphate 3-epimerase | |||
| 8580 | phosphohydrolase | |||
| 8585 | M | M.SsoST152DcmP (100% identity) | CCWGG | M.Sso10534DcmP |
| 8590 | V | V.SsoST152DcmP (100% identity) | V.Sso10534DcmP | |
| 8595 | drug/metabolite exporter YedA | |||
| 10965 | 118 aa hypothetical protein | |||
| 10970 | M | M.SsoST152ORF13040P (100% identity) | CTGCAG | M.Sso10534ORF10970P |
| 10975 | R | SsoST152ORF13040P (100% identity) | CTGCAG | Sso10534ORF10970P |
| 10980 | IS1 family transposase | |||
| 12670 | IS3-like element IS600 family transposase | |||
| 12690 | M | M.SsoST152ORF14720P (100% identity) | A | M.Sso10534ORF12690P |
| 12695 | TrmB family transcriptional regulator | |||
| plasmid pAUSMDU00010534_01 | ||||
| 24625 | 76 aa hypothetical protein | |||
| 24630 | M | M.Sso8361ORFCP (100% identity) | M.Sso10534ORF24630P | |
| 24635 | 269 aa hypothetical protein | |||
| plasmid pAUSMDU00010534_02 | ||||
| 24885 | 97 aa hypothetical protein | |||
| 24890 | M | M.Xca80ORFEP (100% identity) | M.Sso10534ORF24890P | |
| 24895 | 73 aa hypothetical protein | |||