Escherichia coli NZRM4169 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli NZRM4169 RM systems
Ref: Bono,J.L. and On,S.L.W. unpublished
REBASE ref # 29307
| Sequence length: | GenBank #: | |
| Chromosome: | 5,503,501 bp | CP032789 |
| plasmid pNZRM4169: | 93,284 bp | CP032790 |
REBASE acronym: Eco4169
Org_num: 36759
All begin D8Z76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25135 | DUF262 domain-containing protein | |||
| 25140 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco4169ORF25145P |
| 25145 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco4169ORF25145P |
| 25150 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco4169ORF25145P |
| 25155 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2405 | protein DamX | |||
| 2410 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4169DamP |
| 2415 | ribulose-phosphate 3-epimerase | |||
| 2945 | DUF2556 domain-containing protein | |||
| 2950 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco4169ORF2950P |
| 2955 | Fis family transcriptional regulator | |||
| 10045 | recombination protein NinB | |||
| 10050 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco4169ORF10050P |
| 10055 | NinE family protein | |||
| 10975 | phosphohydrolase | |||
| 10980 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco4169DcmP |
| 10985 | V | V.EcosPA8DcmP (100% identity) | V.Eco4169DcmP | |
| 10990 | drug/metabolite exporter YedA | |||
| 11905 | 81 aa hypothetical protein | |||
| 11910 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco4169ORF11910P | |
| 11915 | 329 aa hypothetical protein | |||
| 13705 | TrmB family transcriptional regulator | |||
| 13710 | M | M.EcoZ1836ORF13250P (100% identity) | M.Eco4169ORF13710P | |
| 13715 | DUF1737 domain-containing protein | |||
| 15810 | 61 aa hypothetical protein | |||
| 15825 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco4169ORF15825P | |
| 15830 | lipoprotein | |||
| 23355 | LexA family transcriptional regulator | |||
| 23360 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco4169ORF23360P |
| 23365 | PerC family transcriptional regulator | |||
| 25400 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco4169ORF25400P |
| 25405 | DEAD/DEAH box helicase | |||
| 25435 | N-acetylneuraminate epimerase | |||
| 25440 | R | Ecos1613ORF26795P (100% identity) | Eco4169ORF25440P | |
| 25445 | transposase | |||
| plasmid pNZRM4169 | ||||
| 29000 | 101 aa hypothetical protein | |||
| 29005 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco4169ORF29005P | |
| 29010 | 73 aa hypothetical protein | |||