Escherichia coli RM10410 |
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Putative Escherichia coli RM10410 RM systems
Ref: Carter,M.Q. et al. unpublished
REBASE ref # 29334
Complete sequence: 5,227,472 bp
GenBank #: CP042350
REBASE acronym: Eco10410
Org_num: 36800
All begin FS611_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 25835 | endoribonuclease SymE | |||
| 25840 | S | S.Ecos15955ORF12100P (100% identity) | S.Eco10410ORF25845P | |
| 25845 | M | M.Ecos15955ORF12100P (100% identity) | M.Eco10410ORF25845P | |
| 25850 | R | Ecos15955ORF12100P (99% identity) | Eco10410ORF25845P | |
| 25855 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6965 | TrmB family transcriptional regulator | |||
| 6970 | M | M.EcoTWORF1742P (35% identity) | M.Eco10410ORF6970AP | |
| 6975 | IS4-like element IS421 family transposase | |||
| 6980 | M | M.EcoST130ORF9760P (65% identity) | M.Eco10410ORF6970BP | |
| 6995 | cell envelope integrity protein TolA | |||
| 9365 | NinE family protein | |||
| 9370 | M | M.Ecos15955ORF235P (100% identity) | GATC | M.Eco10410ORF9370P |
| 9375 | recombination protein NinB | |||
| 11410 | drug/metabolite exporter YedA | |||
| 11415 | V | V.SsoSE61DcmP (100% identity) | V.Eco10410DcmP | |
| 11420 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco10410DcmP |
| 11425 | phosphohydrolase | |||
| 12595 | NinE family protein | |||
| 12600 | M | M.Ecos15955ORF235P (100% identity) | GATC | M.Eco10410ORF12600P |
| 12605 | recombination protein NinB | |||
| 19415 | DNA-binding transcriptional regulator Fis | |||
| 19420 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco10410ORF19420P |
| 19425 | DUF2556 domain-containing protein | |||
| 20060 | ribulose-phosphate 3-epimerase | |||
| 20065 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco10410DamP |
| 20070 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6225 | tail fiber assembly protein | |||
| 6230 | R | Ecos15955McrBP (100% identity) | Eco10410McrBP | |
| 6235 | R | Ecos15955McrCP (100% identity) | Eco10410McrCP | |
| 6240 | isocitrate dehydrogenase | |||
| 25850 | type I restriction-modification system | |||
| 25855 | R | Ssp28760MrrP (100% identity) | Eco10410MrrP | |
| 25860 | GTPase | |||