Ethanoligenens harbinense YUAN-3 |
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Putative Ethanoligenens harbinense YUAN-3 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 12364
| Sequence length: | GenBank #: | |
| Chromosome: | 3,008,576 bp | CP002400 (NC_014828) |
| Chromosome: | 2,987,899 bp | ADJQ00000000 (NZ_ADJQ00000000) |
REBASE acronym: Eha
Org_num: 6514
All begin Ethha_, EthhaDRAFT_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 468 | helix-turn-helix domain protein | |||
| 469 | M | M.EhaX29ORF2445P (100% identity) | M.EhaORF469P | |
| 470 | 344 aa hypothetical protein | |||
| 471 | S | S1.EhaW1ORF2450P (100% identity) | S4.EhaORF469P | |
| 472 | S | S2.EhaB49ORF2450P (100% identity) | S3.EhaORF469P | |
| 473 | integrase family protein | |||
| 474 | S | S2.EhaX29ORF2445P (100% identity) | S2.EhaORF469P | |
| 475 | S | S3.EhaX29ORF2445P (90% identity) | S1.EhaORF469P | |
| 476 | R | EhaW1ORF2450P (100% identity) | EhaORF469P | |
| 477 | restriction endonuclease | |||
| Chromosome | ||||
| 1937 | 100 aa hypothetical protein | |||
| ??? | M | M.EhaX29ORF9685P (100% identity) | M.EhaORF1802P | |
| 1939 | R | EhaX29ORF9685P (100% identity) | EhaORF1802P | |
| 1940 | 111 aa hypothetical protein | |||
| 2549 | DNA binding domain protein, excisionase family | |||
| 2550 | M | M.EhaX29ORF9715P (100% identity) | M.EhaORF1808P | |
| 2551 | S | S.EhaX29ORF9715P (100% identity) | S.EhaORF1808P | |
| 2552 | R | EhaX29ORF9715P (100% identity) | EhaORF1808P | |
| 2553 | 309 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1240 | 92 aa hypothetical protein | |||
| 1241 | V | V.EhaX29ORF6420P (100% identity) | V.EhaORF1244P | |
| 1242 | R | R1.EhaX29ORF6420P (100% identity) | R2.EhaORF1244P | |
| 1243 | R | R2.EhaX29ORF6420P (100% identity) | R1.EhaORF1244P | |
| 1244 | M | M1.EhaX29ORF6420P (100% identity) | M1.EhaORF1244P | |
| 1245 | M | M2.EhaX29ORF6420P (100% identity) | M2.EhaORF1244P | |
| 1246 | DNA binding domain protein, excisionase family | |||
| 1761 | 134 aa hypothetical protein | |||
| 1762 | M | M.EhaX29ORF9480P (100% identity) | GATC | M.EhaORF1762P |
| 1763 | 131 aa hypothetical protein | |||
| 1827 | 183 aa hypothetical protein | |||
| 1828 | M | M.EhaX29ORF9815P (100% identity) | M.EhaORF1828P | |
| 1829 | pseudogene | |||
| Chromosome | ||||
| 2534 | 92 aa hypothetical protein | |||
| 2535 | M | M.EhaX29ORF8630P (100% identity) | RGATCY | M.EhaORF1676P |
| 2536 | R | EhaX29ORF8625P (100% identity) | GATC | EhaORF1676P |
| 2537 | 48 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1918 | 511 aa hypothetical protein | |||
| 1919 | M | M.EhaX29ORF10260P (100% identity) | M.EhaORF1919P | |
| 1920 | protein of unknown function DUF955 | |||
| 1921 | 162 aa hypothetical protein | |||
| 1922 | R | EhaX29ORF10260P (100% identity) | EhaORF1919P | |
| 1923 | DNA binding domain protein, excisionase family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 476 | type I site-specific deoxyribonuclease, HsdR | |||
| 477 | R | restriction endonuclease | EhaMrrP | |
| 478 | Resolvase domain | |||
| 958 | 214 aa hypothetical protein | |||
| 959 | R | EhaX29MrrP (100% identity) | EhaMrr2P | |
| 960 | DNA helicase | |||