Salmonella enterica subsp. enterica serovar Indiana SJTUF87912v2 |
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Putative Salmonella enterica subsp. enterica serovar Indiana SJTUF87912v2 RM systems
Ref: Zhang,Z. unpublished
REBASE ref # 26470
| Sequence length: | GenBank #: | |
| Chromosome: | 4,775,876 bp | CP041179 |
| plasmid unnamed: | 236,217 bp | CP041180 |
REBASE acronym: Sen12v2
Org_num: 35709
All begin FKO12_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1750 | cell division protein DamX | |||
| 1755 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen12v2DamP |
| 1760 | ribulose-phosphate 3-epimerase | |||
| 2240 | DUF2556 domain-containing protein | |||
| 2245 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.Sen12v2ORF2245P |
| 2250 | DNA-binding transcriptional regulator Fis | |||
| 3170 | DUF3850 domain-containing protein | |||
| 3175 | M | M.SspZ54ORF6040P (100% identity) | M.Sen12v2ORF3175P | |
| 3180 | replication endonuclease | |||
| 9565 | phosphohydrolase | |||
| 9570 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen12v2DcmP |
| 9575 | V | V.Sensp14178DcmP (100% identity) | V.Sen12v2DcmP | |
| 9580 | drug/metabolite exporter YedA | |||
| plasmid unnamed | ||||
| 23415 | thermonuclease family protein | |||
| 23420 | M | M.YpsF1ORFCP (100% identity) | M.Sen12v2ORF23420P | |
| 23425 | DUF1173 domain-containing protein | |||
| 23985 | 284 aa hypothetical protein | |||
| 23990 | M | M.YpsF1ORFDP (100% identity) | M.Sen12v2ORF23990P | |
| 23995 | DNA-binding protein | |||
| 24370 | 108 aa hypothetical protein | |||
| 24375 | M | M.YpsF1ORFBP (100% identity) | M.Sen12v2ORF24375P | |
| 24380 | 202 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17595 | 33 aa hypothetical protein | |||
| 17600 | R | Sensp14154ORF17330P (100% identity) | CAGAG | Sen12v2ORF17605P |
| 17605 | M | M.Sensp14178ORF17290P (100% identity) | CAGAG | M.Sen12v2ORF17605P |
| 17610 | MFS transporter | |||
| 20290 | S8 family peptidase | |||
| 20295 | M | M.Sensp14178ORF19930P (100% identity) | M.Sen12v2ORF20295P | |
| 20300 | R | Sensp14178ORF19930P (100% identity) | Sen12v2ORF20295P | |
| 20305 | DUF4102 domain-containing protein | |||