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Putative Salmonella enterica subsp. enterica serovar Senftenberg SL180013 RM systems
Ref: Morita,M. et al. unpublished
REBASE ref # 29011
Complete sequence: 4,980,580 bp
GenBank #: AP019692
REBASE acronym: Sen80013
Org_num: 35633
All begin SL180013_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
6300 | 207 aa hypothetical protein | |||
6310 | M | M.Sen71954ORF5700P (100% identity) | M.Sen80013ORF6310P | |
6320 | anticodon nuclease | |||
6330 | S | S.Sen71954ORF5700P (100% identity) | S.Sen80013ORF6310P | |
6340 | 61 aa hypothetical protein | |||
6350 | R | Sen71954ORF5700P (100% identity) | Sen80013ORF6310P | |
6360 | 72 aa hypothetical protein | |||
39970 | restriction endonuclease | |||
39980 | R | Sen775WIIP (100% identity) | CNGANNNNNNNNTGCG | Sen80013ORF39990P |
39990 | M | M.Sen775WII (100% identity) | CNGANNNNNNNNTGCG | M.Sen80013ORF39990P |
40000 | S | S.SenSW70ORF19425P (100% identity) | CNGANNNNNNNNTGCG | S.Sen80013ORF39990P |
40010 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
3630 | cell division protein DamX | |||
3640 | M | M.StyTDamP (100% identity) | GATC | M.Sen80013DamP |
3650 | ribulose-phosphate 3-epimerase | |||
4560 | 54 aa hypothetical protein | |||
4570 | M | M.Sen775WORF2695P (100% identity) | ATGCAT | M.Sen80013ORF4570P |
4580 | DNA-binding protein Fis | |||
10910 | 353 aa hypothetical protein | |||
10920 | RM | Sma1978ORFHP (100% identity) | CTTGAC | Sen80013ORF10920P |
10930 | 681 aa hypothetical protein | |||
14080 | 80 aa hypothetical protein | |||
??? | M | M1.SenRM074ORF7060P (100% identity) | M.Sen80013ORFAP | |
14100 | conjugal transfer protein TraR | |||
14120 | 74 aa hypothetical protein | |||
14130 | M | M.Ecl23bORF2925P (97% identity) | M.Sen80013ORF14130P | |
14140 | DUF1317 domain-containing protein | |||
20030 | replication protein | |||
20040 | M | M.SenST224ORF7170P (100% identity) | M.Sen80013ORF20040P | |
20050 | crossover junction endodeoxyribonuclease rusA | |||
27930 | drug/metabolite exporter YedA | |||
27940 | V | V.StyUK1DcmP (100% identity) | V.Sen80013DcmP | |
27950 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen80013DcmP |
27960 | phosphohydrolase | |||
28850 | 59 aa hypothetical protein | |||
28860 | M | M.SenS051ORF14720P (100% identity) | M.Sen80013ORF28860P | |
28870 | 82 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
11270 | Cd(II)/Pb(II)-responsive transcriptional | |||
11280 | M | M.SenC6482ORF1287P (100% identity) | M.Sen80013ORF11280P | |
11290 | R | Sen25333ORF15170P (100% identity) | Sen80013ORF11280P | |
11300 | 208 aa hypothetical protein | |||
35050 | cytochrome ubiquinol oxidase subunit I | |||
35060 | R | Sen775WIVP (100% identity) | CAGAG | Sen80013ORF35070P |
35070 | M | M.SenSW70ORF17195P (100% identity) | CAGAG | M.Sen80013ORF35070P |
35080 | MFS transporter | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
39960 | membrane protein | |||
39970 | R | StyTMrrP (100% identity) | Sen80013MrrP | |
39980 | type I restriction-modification system |