Salmonella enterica subsp. enterica serovar Typhimurium TJWQ005 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium TJWQ005 RM systems
Ref: Yang,D. et al. unpublished
REBASE ref # 29003
| Sequence length: | GenBank #: | |
| Chromosome: | 4,982,919 bp | CP040458 |
| plasmid unnamed1: | 254,752 bp | CP040457 |
REBASE acronym: SenQ005
Org_num: 35614
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | restriction endonuclease | |||
| ??? | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenQ005ORFKP |
| ??? | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenQ005ORFKP |
| ??? | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenQ005ORFKP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | M | M.StyTDamP (100% identity) | GATC | M.SenQ005DamP |
| ??? | M | M.StyUK1III (100% identity) | ATGCAT | M.SenQ005ORFFP |
| ??? | M | M.SensSZL38ORF19965P (100% identity) | M.SenQ005ORFIP | |
| ??? | M | M.Ssp17155ORFGP (100% identity) | M.SenQ005ORFAP | |
| ??? | M | M.StyTORF1914P (100% identity) | M.SenQ005ORFCP | |
| ??? | M | M.Ssp17155ORFIP (100% identity) | M.SenQ005ORFGP | |
| ??? | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenQ005DcmP |
| ??? | V | V.StyUK1DcmP (100% identity) | V.SenQ005DcmP | |
| ??? | RM | StyUK1IV (100% identity) | GATCAG | SenQ005ORFJP |
| ??? | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.SenQ005ORFBP |
| plasmid unnamed1 | ||||
| ??? | M | M.YpsF1ORFDP (100% identity) | M.SenQ005ORFMP | |
| ??? | M | M.YpsF1ORFBP (100% identity) | M.SenQ005ORFEP | |
| ??? | M | M.YpsF1ORFCP (100% identity) | M.SenQ005ORFDP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | R | StyUK1IP (100% identity) | CAGAG | SenQ005ORFLP |
| ??? | M | M.StyUK1I (100% identity) | CAGAG | M.SenQ005ORFLP |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | R | StyUK1MrrP (100% identity) | SenQ005MrrP | |
| ??? | Type I restriction enzyme EcoKI R protein HsdR | |||