Synechococcus species PCC 11901 |
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Putative Synechococcus species PCC 11901 RM systems
Ref: Wlodarczyk,A.J. et al. unpublished
REBASE ref # 28999
| Sequence length: | GenBank #: | |
| Chromosome: | 3,081,514 bp | CP040360 |
| plasmid unnamed2: | 88,148 bp | CP040356 |
| plasmid unnamed3: | 58,428 bp | CP040357 |
| plasmid unnamed4: | 63,677 bp | CP040358 |
REBASE acronym: Ssp11901
Org_num: 35600
All begin FEK30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15445 | 130 aa hypothetical protein | |||
| 15450 | M | M.Ssp130192ORFHP (99% identity) | M.Ssp11901ORF15450P | |
| 15455 | S | restriction endonuclease subunit S | S1.Ssp11901ORF15450P | |
| 15460 | IS630 family transposase | |||
| 15465 | transposase | |||
| 15470 | IS256 family transposase | |||
| 15475 | IS256 family transposase | |||
| 15480 | IS256 family transposase | |||
| 15485 | IS4 family transposase | |||
| 15490 | S | S.EcoNT1W25ORFDP (54% identity) | S2.Ssp11901ORF15450P | |
| 15495 | endonuclease domain-containing protein | |||
| 15500 | AbrB/MazE/SpoVT family DNA-binding | |||
| 15505 | type II toxin-antitoxin system VapC family | |||
| 15510 | 142 aa hypothetical protein | |||
| 15515 | IS5 family transposase | |||
| 15520 | R | Ssp7117ORF11290P (87% identity) | Ssp11901ORF15450P | |
| 15525 | aromatic ring-hydroxylating dioxygenase subunit | |||
| plasmid unnamed2 | ||||
| 285 | IS5 family transposase | |||
| 290 | M | Ssp42902ORFMP (40% identity) | M.Ssp11901ORF290P | |
| 295 | IS5 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1860 | chaperonin GroEL | |||
| 1865 | M | M.EoxN41PORF18960P (56% identity) | M.Ssp11901ORF1865P | |
| 1870 | 296 aa hypothetical protein | |||
| 8335 | diguanylate cyclase | |||
| 8340 | M | M.Ssp8807ORF4355P (99% identity) | M.Ssp11901ORF8340P | |
| 8345 | UDP-N-acetylmuramoyl-L-alanine--D-glutamate | |||
| 10050 | 191 aa hypothetical protein | |||
| 10055 | M | M.Ssp42902ORFCAP (100% identity) | CYCGRG | M.Ssp11901ORF10055AP |
| 10060 | M | M.Ssp7117ORF6065P (36% identity) | CYCGRG | M.Ssp11901ORF10055BP |
| 10065 | R | Ssp7117ORF6065P (93% identity) | CYCGRG | Ssp11901ORF10055P |
| 10070 | U32 family peptidase | |||
| 10270 | inorganic diphosphatase | |||
| 10275 | M | M.Ssp73109ORF6305P (99% identity) | M.Ssp11901ORF10275P | |
| 10280 | S | S.Ssp73109ORF6305P (96% identity) | S.Ssp11901ORF10275P | |
| 10285 | PIN domain-containing protein | |||
| 13190 | type I-MYXAN CRISPR-associated protein | |||
| 13195 | RM | Ssp42902ORFIP (94% identity) | Ssp11901ORF13195P | |
| 13200 | 90 aa hypothetical protein | |||
| 15835 | 68 aa hypothetical protein | |||
| 15840 | RM | Ssp7003ORF12975P (93% identity) | Ssp11901ORF15840P | |
| 15845 | YgiT-type zinc finger protein | |||
| plasmid unnamed3 | ||||
| 545 | type II toxin-antitoxin system VapC family | |||
| 550 | M | Lsp7376ORF3680P (65% identity) | M.Ssp11901ORF550P | |
| 555 | 246 aa hypothetical protein | |||
| 610 | 76 aa hypothetical protein | |||
| 615 | M | M.Ssp42902ORFLP (96% identity) | M.Ssp11901ORF615P | |
| 620 | 109 aa hypothetical protein | |||
| plasmid unnamed4 | ||||
| 995 | 86 aa hypothetical protein | |||
| 1000 | M | M.Ssp11901ORF615P (79% identity) | M.Ssp11901ORF1000P | |
| 1005 | 85 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12385 | HEAT repeat domain-containing protein | |||
| 12390 | M | M.Ssp130192ORFAP (98% identity) | GATC | M.Ssp11901ORF12390P |
| 12395 | group 1 truncated hemoglobin | |||