Sphingobacterium thalpophilum NCTC11429 |
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Putative Sphingobacterium thalpophilum NCTC11429 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 5,962,893 bp
GenBank #: LR590484
REBASE acronym: Sth11429
Org_num: 35023
All begin NCTC11429_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2887 | Uncharacterised protein | |||
| 2888 | R | Ean53ORF1823P (83% identity) | ACCNNNNNNTCG | Sth11429IP |
| 2889 | Integrase | |||
| 2890 | S | S1.FspYJ01ORF8365P (75% identity) | ACCNNNNNNTCG | S1.Sth11429I |
| 2891 | S | S1.CspTD35ORF11910P (37% identity) | ACCNNNNNNTCG | S2.Sth11429I |
| 2892 | Uncharacterised protein | |||
| 2893 | Protein of uncharacterised function (DUF3800) | |||
| 2894 | M | M.Cin177ORFAP (94% identity) | ACCNNNNNNTCG | M.Sth11429I |
| 2895 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 451 | Uncharacterised protein | |||
| 452 | M | M.Ssp4668ORFBP (92% identity) | M.Sth11429ORF452P | |
| 453 | Uncharacterised protein | |||
| 3611 | Uncharacterised protein | |||
| 3612 | V | V.SthYX3ORFAP (100% identity) | V.Sth11429ORF3615P | |
| 3613 | Uncharacterised protein | |||
| 3614 | HTH-type transcriptional regulator sinR | |||
| 3615 | M | M.SthYX3ORFAP (99% identity) | M.Sth11429ORF3615P | |
| 3616 | R | SthYX3ORFAP (99% identity) | Sth11429ORF3615P | |
| 3617 | Beta-glucuronidase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3764 | fumarate/nitrate reduction transcriptional | |||
| 3765 | R | Ean36719McrBP (84% identity) | Sth11429McrBP | |
| 3766 | R | EanSUEMcrCP (89% identity) | Sth11429McrCP | |
| 3767 | Nitrogen regulation protein C | |||