Actinobacillus pleuropneumoniae serovar 6 Femo |
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Putative Actinobacillus pleuropneumoniae serovar 6 Femo RM systems
Ref: Xu,Z. et al. J. Bacteriol. (2010) In press
REBASE ref # 12330
Contig set: 2,310,958 bp
GenBank #: ADOG00000000
REBASE acronym: Apl6
Org_num: 6392
All begin appser6_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3420 | 303 aa hypothetical protein | |||
| 3430 | S | S.AplFemORF1505P (100% identity) | S.Apl6ORF3400P | |
| 3440 | Anticodon nuclease | |||
| 3450 | R | AplFemORF1505P (100% identity) | Apl6ORF3400P | |
| 3460 | ABC transporter ATP-binding protein uup-1 | |||
| 3390 | DNA gyrase subunit A | |||
| 3400 | M | M.AplJORF298P (99% identity) | M.Apl6ORF956P | |
| 3410 | 312 aa hypothetical protein | |||
| 15660 | Phosphatidylserine decarboxylase beta chain | |||
| 15670 | R | AplFemORF8500P (100% identity) | Apl6ORF2000P | |
| 15680 | M | M.AplS4074ORF8040P (100% identity) | M.Apl6ORF2000P | |
| 15690 | 331 aa Conserved hypothetical DNA binding protein | |||
| 15700 | S | Type I restriction-modification system, S | S.Apl6ORF2000P | |
| 22120 | S | S1.Apl8405ORF7680P (83% identity) | S1.Apl6ORF2000P | |
| 22130 | Integrase | |||
| 22140 | S | S2.Apl8405ORF7680P (66% identity) | S2.Apl6ORF2000P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2430 | Uncharacterized sodium-dependent transporter | |||
| 2440 | M | M.AplS4074ORF995P (100% identity) | GATC | M.Apl6ORF2440P |
| 2450 | 3-dehydroquinate synthase | |||
| 21920 | 135 aa hypothetical protein | |||
| 21930 | M | M.AplFemORF3055P (74% identity) | GATC | M.Apl6ORF714P |
| 21940 | replicative DNA helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7760 | 957 aa hypothetical protein | |||
| 7770 | R | AplFemORF4110P (100% identity) | Apl6ORF7780P | |
| 7780 | M | M.AplFemORF4110P (100% identity) | M.Apl6ORF7780P | |
| 7790 | Uncharacterized HTH-type transcriptional | |||
| 9040 | 587 aa hypothetical protein | |||
| 9050 | R | AplFemORF4765P (100% identity) | Apl6ORF9060P | |
| 9060 | M | Type III restriction-modification system | M.Apl6ORF9060P | |
| 9070 | M | Type III restriction-modification system | M.Apl6ORF9070P | |
| 9080 | tRNA (mo5U34)-methyltransferase | |||
| 22160 | M | M.AplS4074ORF4325P (52% identity) | M.Apl6ORF2207P | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 260 | Imidazole glycerol phosphate synthase subunit | |||
| 270 | R | Apl4McrBP (85% identity) | Apl6McrBP | |
| 280 | Phosphoribosyl-ATP pyrophosphatase | |||
| 3860 | NAD-dependent deacetylase sirtuin 5 | |||
| 3870 | R | Apl10MrrP (100% identity) | Apl6MrrP | |
| 3880 | 41 aa hypothetical protein | |||