Escherichia coli O104:H4 FWSEC0009 |
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Putative Escherichia coli O104:H4 FWSEC0009 RM systems
Ref: Tyson,S. et al. unpublished
REBASE ref # 28572
| Sequence length: | GenBank #: | |
| Chromosome: | 5,277,234 bp | CP031902 |
| plasmid unnamed18: | 88,545 bp | CP031903 |
REBASE acronym: Eco0009
Org_num: 34299
All begin C8200_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23795 | DUF262 domain-containing protein | |||
| 23800 | R | SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | Eco0009ORF23805P |
| 23805 | M | M.SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | M.Eco0009ORF23805P |
| 23810 | S | S.SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | S.Eco0009ORF23805P |
| 23815 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2320 | cell division protein DamX | |||
| 2325 | M | DNA adenine methylase | GATC | M.Eco0009DamP |
| 2330 | ribulose-phosphate 3-epimerase | |||
| 2910 | DUF2556 domain-containing protein | |||
| 2915 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.Eco0009ORF2915P |
| 2920 | Fis family transcriptional regulator | |||
| 10730 | phosphohydrolase | |||
| 10735 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco0009DcmP |
| 10740 | V | V.SsoSE61DcmP (100% identity) | V.Eco0009DcmP | |
| 10745 | drug/metabolite exporter YedA | |||
| 11345 | PerC family transcriptional regulator | |||
| 11350 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco0009ORF11350P |
| 11355 | LexA family transcriptional regulator | |||
| 11390 | 67 aa hypothetical protein | |||
| 11395 | M | M.EcoOS402ORF3850P (100% identity) | A | M.Eco0009ORF11395P |
| 11415 | DUF1737 domain-containing protein | |||
| 15495 | 108 aa hypothetical protein | |||
| 15515 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco0009ORF15515P |
| 15520 | TrmB family transcriptional regulator | |||
| 17660 | LexA family transcriptional regulator | |||
| 17665 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco0009ORF17665P |
| 17670 | R | Sso1099IP (100% identity) | CTGCAG | Eco0009ORF17665P |
| 17675 | 261 aa hypothetical protein | |||
| 17760 | regulator | |||
| 17765 | M | M.Esp10290ORF1290P (100% identity) | GATC | M.Eco0009ORF17765P |
| 17770 | DUF1382 family protein | |||
| plasmid unnamed18 | ||||
| 28170 | 0 aa hypothetical protein | |||
| 28175 | M | M.Sso3794ORF26595P (100% identity) | SAY | M.Eco0009ORF28175P |
| 28180 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5015 | 97 aa hypothetical protein | |||
| 5020 | R | Kpn0718ORF815P (100% identity) | ACCACC | Eco0009ORF5025P |
| 5025 | M | M.Kpn0718ORF815P (100% identity) | ACCACC | M.Eco0009ORF5025P |
| 5030 | serine protease | |||