Azospirillum species TSH100 |
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Putative Azospirillum species TSH100 RM systems
Ref: Gao,N. et al. unpublished
REBASE ref # 28535
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,712,114 bp | CP039634 |
| chromosome 2: | 1,162,302 bp | CP039635 |
| chromosome 3: | 917,252 bp | CP039636 |
| chromosome 5: | 583,445 bp | CP039638 |
| plasmid p2: | 54,389 bp | CP039641 |
REBASE acronym: AspTSH100
Org_num: 34243
All begin E6C72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 5 | ||||
| 26535 | 182 aa hypothetical protein | |||
| 26540 | M | M.Bpa21ORFBP (92% identity) | M.AspTSH100ORF26540P | |
| 26545 | anticodon nuclease | |||
| 26550 | S | S.PspMPC6ORF145P (43% identity) | S.AspTSH100ORF26540P | |
| 26555 | R | Bpa21ORFBP (89% identity) | AspTSH100ORF26540P | |
| 26560 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1835 | HAD family phosphatase | |||
| 1840 | M | M.AspTSA2sORF25135P (97% identity) | RGATCY | M.AspTSH100ORF1840P |
| 1845 | Crp/Fnr family transcriptional regulator | |||
| chromosome 2 | ||||
| 16365 | nuclease inhibitor protein | |||
| 16370 | M | M.AhuZ5ORFBP (97% identity) | M.AspTSH100ORF16370P | |
| 16375 | 85 aa hypothetical protein | |||
| chromosome 3 | ||||
| 19780 | response regulator transcription factor | |||
| 19785 | R | PprC007ORFVP (67% identity) | AspTSH100ORF19790P | |
| 19790 | M | M.Cba153FORF5160P (45% identity) | M.AspTSH100ORF19790P | |
| 19795 | 520 aa hypothetical protein | |||
| chromosome 5 | ||||
| 27180 | dihydroneopterin aldolase | |||
| 27185 | M | M.Aor14407ORF4645P (98% identity) | GANTC | M.AspTSH100ORF27185P |
| 27190 | ribonuclease HII | |||
| plasmid p2 | ||||
| 31640 | 263 aa hypothetical protein | |||
| 31645 | M | M.Asp70021ORF30315P (68% identity) | M.AspTSH100ORF31645P | |
| 31650 | DUF2442 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 15050 | IS3 family transposase | |||
| 15055 | R | Ali4BORF2088P (97% identity) | AspTSH100ORF15065P | |
| 15060 | DUF262 domain-containing protein | |||
| 15065 | M | M.Ali4BORF2090P (52% identity) | M.AspTSH100ORF15065P | |
| 15070 | 235 aa hypothetical protein | |||