|
Putative Aeromonas schubertii LF1708 RM systems
Ref: Liu,C. et al. J. Fish Dis. 41 (10), 1529-1538 (2018)
REBASE ref # 28532
Complete sequence: 4,350,713 bp
GenBank #: CP039611
REBASE acronym: Asc1708
Org_num: 34119
All begin E2P79_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
100 | beta-lactam response regulator transcription | |||
105 | R | VchSa5YORF2649P (99% identity) | Asc1708ORF120P | |
110 | anticodon nuclease | |||
115 | S | S.Vch10432ORF3652P (99% identity) | S.Asc1708ORF120P | |
120 | M | M.VchSa5YORF2649P (99% identity) | M.Asc1708ORF120P | |
125 | helix-turn-helix transcriptional regulator | |||
6725 | ATP-binding protein | |||
6730 | R | Ahy8N2ORFBP (99% identity) | Asc1708ORF6740P | |
6735 | S | S.AcaSVJ23ORF12770P (61% identity) | S.Asc1708ORF6740P | |
6740 | M | M.Asp2167ORFAP (99% identity) | M.Asc1708ORF6740P | |
6745 | 131 aa hypothetical protein | |||
12035 | 185 aa hypothetical protein | |||
12040 | S | S.PaesD5ORF11295P (72% identity) | S.Asc1708ORF12045P | |
12045 | M | M.Psh725ORF12755P (89% identity) | M.Asc1708ORF12045P | |
12050 | R | Psh725ORF12755P (99% identity) | Asc1708ORF12045P | |
12055 | helix-turn-helix transcriptional regulator | |||
14045 | restriction endonuclease | |||
14050 | R | Asc43700ORF2590P (97% identity) | Asc1708ORF14060P | |
14055 | Fic family protein | |||
14060 | M | M.Asc43700ORF2590P (96% identity) | M.Asc1708ORF14060P | |
14065 | S | S.AhyWCX23ORF2120P (42% identity) | S.Asc1708ORF14060P | |
14070 | ATP-binding protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2805 | cell division protein DamX | |||
2810 | M | M.Asc43700DamP (99% identity) | M.Asc1708DamP | |
2815 | ribulose-phosphate 3-epimerase | |||
20815 | 8-oxoguanine DNA glycosylase | |||
20820 | M | M.Ave32286ORFAP (100% identity) | M.Asc1708ORF20820P | |
20825 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
14040 | pseudogene | |||
14045 | R | Asc1483MrrP (95% identity) | Asc1708MrrP | |
14050 | type I restriction-modification system |