Escherichia coli PigCaeca_1 |
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Putative Escherichia coli PigCaeca_1 RM systems
Ref: REHAB consortium,T. unpublished
REBASE ref # 28556
| Sequence length: | GenBank #: | |
| Chromosome: | 4,742,390 bp | CP039298 |
| plasmid unnamed1: | 105,771 bp | CP039299 |
REBASE acronym: EcoPC1
Org_num: 34311
All begin E7Z58_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 940 | phosphohydrolase | |||
| 945 | M | M.SdyFF10DcmP (100% identity) | CCWGG | M.EcoPC1DcmP |
| 950 | V | V.SsoSE61DcmP (100% identity) | V.EcoPC1DcmP | |
| 955 | drug/metabolite exporter YedA | |||
| 5075 | phage holin, lambda family | |||
| 5080 | M | M.EcoSTEC413ORF8565P (100% identity) | M.EcoPC1ORF5080P | |
| 5085 | TrmB family transcriptional regulator | |||
| 9450 | 379 aa hypothetical protein | |||
| 9455 | R | EcoYPE3ORF18250P (100% identity) | EcoPC1ORF9460P | |
| 9460 | M | M.EcoYPE3ORF18250P (100% identity) | M.EcoPC1ORF9460P | |
| 9465 | 257 aa hypothetical protein | |||
| 9665 | LexA family transcriptional regulator | |||
| 9670 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.EcoPC1ORF9670P |
| 9675 | PerC family transcriptional regulator | |||
| ??? | phage N-6-adenine-methyltransferase | |||
| 12985 | M | M.EcoE75ORFEP (100% identity) | GATC | M.EcoPC1ORF12985P |
| 12990 | PerC family transcriptional regulator | |||
| 16615 | cell division protein DamX | |||
| 16620 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoPC1DamP |
| 16625 | ribulose-phosphate 3-epimerase | |||
| 17245 | DUF2556 domain-containing protein | |||
| 17250 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoPC1ORF17250P |
| 17255 | DNA-binding transcriptional regulator Fis | |||
| 21855 | recombination protein NinB | |||
| 21860 | M | M.Eco46C05ORF6785P (100% identity) | GATC | M.EcoPC1ORF21860P |
| 21865 | NinE family protein | |||
| plasmid unnamed1 | ||||
| 23605 | 101 aa hypothetical protein | |||
| 23610 | M | M.SflP099ORF24190P (100% identity) | M.EcoPC1ORF23610P | |
| 23615 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5005 | isocitrate dehydrogenase | |||
| 5010 | R | EcoH40aMcrCP (100% identity) | EcoPC1McrCP | |
| 5015 | R | EcoLR06McrBP (100% identity) | EcoPC1McrBP | |
| 5020 | recombinase family protein | |||