Prevotella intermedia KCOM 1779 |
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Putative Prevotella intermedia KCOM 1779 RM systems
Ref: Kook,J.-K. et al. unpublished
REBASE ref # 24621
GenBank #: PGGD00000000
REBASE acronym: Pin1779
Org_num: 33997
All begin CUB97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 160 | glycine cleavage system H protein | |||
| 165 | C | C.Pin2033ORF9730P (100% identity) | C.Pin1779ORF180P | |
| 170 | M48 family peptidase | |||
| 175 | R | TfoUB4ORF338P (99% identity) | Pin1779ORF180P | |
| 180 | M | M.TfoUB4ORF338P (99% identity) | M.Pin1779ORF180P | |
| 185 | 339 aa hypothetical protein | |||
| 190 | S | S.Tfo43037ORF1945P (75% identity) | S2.Pin1779ORF180P | |
| 195 | 93 aa hypothetical protein | |||
| 10900 | integrase | |||
| 10905 | S | S1.BcaC61ORF1816P (48% identity) | S2.Pin1779ORF10930P | |
| 10910 | S | S2.ScoH2497ORFDP (54% identity) | S1.Pin1779ORF10930P | |
| 10915 | 165 aa hypothetical protein | |||
| 10920 | death-on-curing protein | |||
| 10925 | DNA-binding protein | |||
| 10930 | M | M.Pin1944ORF3230P (98% identity) | M.Pin1779ORF10930P | |
| 10935 | R | Pin1944ORF3230P (97% identity) | Pin1779ORF10930P | |
| 10940 | C | C.Psp860ORF4885P (98% identity) | C.Pin1779ORF10930P | |
| 10945 | helicase | |||
| 11425 | nicotinamidase | |||
| 11430 | M | M.Pin2836ORF10700P (98% identity) | M.Pin1779ORF11430P | |
| 11435 | S | S.GprHORF4000P (39% identity) | S.Pin1779ORF11430P | |
| 11440 | R | Pin14ORF436P (99% identity) | Pin1779ORF11430P | |
| 11445 | zinc-dependent metalloprotease | |||
| 4615 | 213 aa hypothetical protein | |||
| 4620 | S | S2.Pin2833ORF7120P (49% identity) | S4.Pin1779ORF4645P | |
| 4625 | integrase | |||
| 4630 | S | S3.PdeF0115ORF540P (67% identity) | S3.Pin1779ORF4645P | |
| 4635 | S | S3.Tsp286ORF8345P (43% identity) | S2.Pin1779ORF4645P | |
| 4640 | DUF1016 domain-containing protein | |||
| 4645 | M | M.TfoUB20ORF1687P (97% identity) | M.Pin1779ORF4645P | |
| 4650 | R | Pni630IIP (97% identity) | Pin1779ORF4645P | |
| 4655 | 349 aa hypothetical protein | |||
| 4660 | C | C.Tfo10960ORF2245P (100% identity) | C.Pin1779ORF4645P | |
| 4665 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10000 | NADH:ubiquinone reductase (Na(+)-transporting) | |||
| 10005 | R | Pin2033ORF4010P (99% identity) | Pin1779ORF10010P | |
| 10010 | M | M.Pin2033ORF4010P (99% identity) | M.Pin1779ORF10010P | |
| 10015 | RNA polymerase subunit sigma | |||
| 5040 | polyketide cyclase | |||
| 5045 | M | M.PinWW414ORF4330P (99% identity) | M.Pin1779ORF5045P | |
| 5050 | R | PinWW414ORF4330P (98% identity) | Pin1779ORF5045P | |
| 5055 | DUF4294 domain-containing protein | |||
| 5305 | 69 aa hypothetical protein | |||
| 5310 | M | M.Pin1653ORF3095P (99% identity) | M.Pin1779ORF5310P | |
| 5315 | HNH endonuclease | |||
| 5310 | modification methylase | |||
| 5315 | R | PinWW414ORF9365P (99% identity) | Pin1779ORF5315P | |
| 5320 | 65 aa hypothetical protein | |||
| 7840 | 84 aa hypothetical protein | |||
| 7845 | V | V.Pni630ORF10890P (100% identity) | V.Pin1779ORF7860P | |
| 7850 | 510 aa hypothetical protein | |||
| 7855 | ATP-binding protein | |||
| 7860 | M | M.Pni630ORF10890P (99% identity) | M.Pin1779ORF7860P | |
| 7865 | XRE family transcriptional regulator | |||
| 8300 | 69 aa hypothetical protein | |||
| 8305 | M | M.Pin2833I (99% identity) | GATC | M.Pin1779I |
| 8310 | R | Pin2833IP (99% identity) | GATC | Pin1779IP |
| 8315 | 293 aa hypothetical protein | |||