Salmonella enterica subsp. enterica serovar Heidelberg C_NS-029 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg C_NS-029 RM systems
Ref: Deblais,L. et al. unpublished
REBASE ref # 28192
GenBank #: PGVX00000000
REBASE acronym: SenNS029
Org_num: 33709
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 147 | 93 aa hypothetical protein | |||
| 148 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenNS029ORFBP |
| 151 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.SenNS029ORFBP |
| 155 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenNS029ORFBP |
| 163 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8 | 284 aa conserved hypothetical protein | |||
| 9 | M | M.YpsF1ORFDP (100% identity) | M.SenNS029ORFIP | |
| 10 | 387 aa hypothetical protein | |||
| 71 | Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain | |||
| 73 | M | M.YpsF1ORFCP (100% identity) | M.SenNS029ORFDP | |
| 76 | 77 aa hypothetical protein KPH11_265 | |||
| 51 | DUF1998 domain-containing protein | |||
| 56 | RM | Sens12373ORF19575P (100% identity) | GATCAG | SenNS029ORFHP |
| 62 | 151 aa hypothetical protein | |||
| 60 | 238 aa hypothetical protein | |||
| 63 | M | M.YpsF1ORFBP (100% identity) | M.SenNS029ORFGP | |
| 65 | 100 aa hypothetical protein APECO1_O1R211 | |||
| 95 | tRNA-dihydrouridine synthase B | |||
| 96 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenNS029ORFEP |
| 98 | 102 aa hypothetical protein | |||
| 107 | DNA adenine methylase | |||
| 110 | M | M.StyTDamP (100% identity) | GATC | M.SenNS029DamP |
| 111 | DamX protein | |||
| 151 | exonuclease | |||
| 153 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.SenNS029ORFCP |
| 154 | 79 aa hypothetical protein | |||
| 146 | YfdA | |||
| 150 | M | M.StyR64ORFAP (100% identity) | M.SenNS029ORFJP | |
| 155 | Uncharacterised protein | |||
| 532 | Uncharacterised protein | |||
| 533 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.SenNS029DcmP |
| 535 | V | V.StyTDcmP (100% identity) | V.SenNS029DcmP | |
| 536 | DMT superfamily transporter inner membrane protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 79 | metabolite transport protein | |||
| 81 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.SenNS029ORFAP |
| 82 | R | SenNS033ORFAP (100% identity) | CAGAG | SenNS029ORFAP |
| 84 | 71 aa hypothetical protein SEHO0A_00325 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 155 | Type I restriction enzyme EcoKI R protein HsdR | |||
| 163 | R | StyUK1MrrP (100% identity) | SenNS029MrrP | |
| 164 | 62 aa hypothetical protein | |||