Salmonella enterica subsp. enterica serovar Heidelberg C_NS-025 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg C_NS-025 RM systems
Ref: Deblais,L. et al. unpublished
REBASE ref # 28192
Contig set: 4,864,676 bp
GenBank #: PGWB00000000 (NZ_PGWB00000000)
REBASE acronym: SenNS025
Org_num: 33705
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 147 | 93 aa hypothetical protein | |||
| 148 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenNS025ORFDP |
| 151 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.SenNS025ORFDP |
| 155 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenNS025ORFDP |
| 163 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20 | 102 aa hypothetical protein | |||
| 23 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenNS025ORFCP |
| 25 | tRNA-dihydrouridine synthase B | |||
| 51 | DUF1998 domain-containing protein | |||
| 56 | RM | Sens12373ORF19575P (100% identity) | GATCAG | SenNS025ORFEP |
| 62 | 151 aa hypothetical protein | |||
| 141 | YfdA | |||
| 145 | M | M.StyR64ORFAP (100% identity) | M.SenNS025ORFFP | |
| 150 | Uncharacterised protein | |||
| 118 | 79 aa hypothetical protein | |||
| 119 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.SenNS025ORFAP |
| 120 | exonuclease | |||
| 934 | DamX protein | |||
| 936 | M | M.StyTDamP (100% identity) | GATC | M.SenNS025DamP |
| 937 | DNA adenine methylase | |||
| 1909 | DMT superfamily transporter inner membrane protein | |||
| 1910 | V | V.StyTDcmP (100% identity) | V.SenNS025DcmP | |
| 1911 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.SenNS025DcmP |
| 1913 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 79 | metabolite transport protein | |||
| 81 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.SenNS025ORFBP |
| 82 | R | SenNS033ORFAP (100% identity) | CAGAG | SenNS025ORFBP |
| 84 | 71 aa hypothetical protein SEHO0A_00325 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 155 | Type I restriction enzyme EcoKI R protein HsdR | |||
| 163 | R | StyUK1MrrP (100% identity) | SenNS025MrrP | |
| 164 | 62 aa hypothetical protein | |||