Salmonella enterica subsp. enterica serovar Heidelberg C_NS-009 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg C_NS-009 RM systems
Ref: Deblais,L. et al. unpublished
REBASE ref # 28192
Contig set: 5,006,742 bp
GenBank #: PGWG00000000 (NZ_PGWG00000000)
REBASE acronym: SenNS009
Org_num: 33700
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 42 | 93 aa hypothetical protein | |||
| 43 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenNS009ORFDP |
| 46 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.SenNS009ORFDP |
| 50 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenNS009ORFDP |
| 57 | 104 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 51 | DUF1998 domain-containing protein | |||
| 56 | RM | Sens12373ORF19575P (100% identity) | GATCAG | SenNS009ORFHP |
| 62 | 151 aa hypothetical protein | |||
| 99 | DMT superfamily transporter inner membrane protein | |||
| 100 | V | V.StyTDcmP (100% identity) | V.SenNS009DcmP | |
| 101 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.SenNS009DcmP |
| 103 | Uncharacterised protein | |||
| 152 | 158 aa hypothetical protein | |||
| 153 | M | M.SenS098ORF24185P (100% identity) | M.SenNS009ORFEP | |
| 157 | 82 aa hypothetical protein | |||
| 95 | 79 aa hypothetical protein | |||
| 96 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.SenNS009ORFAP |
| 97 | exonuclease | |||
| 186 | Uncharacterised protein | |||
| 188 | M | M.StyR64ORFAP (100% identity) | M.SenNS009ORFGP | |
| 194 | YfdA | |||
| 934 | DamX protein | |||
| 936 | M | M.StyTDamP (100% identity) | GATC | M.SenNS009DamP |
| 937 | DNA adenine methylase | |||
| 1033 | tRNA-dihydrouridine synthase B | |||
| 1034 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenNS009ORFBP |
| 1036 | 102 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 265 | 420 aa hypothetical protein AF22_05075 | |||
| 266 | R | type III restriction-modification system protein | CAGAG | SenNS009ORFFP |
| 268 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.SenNS009ORFFP |
| 269 | metabolite transport protein | |||
| 948 | 71 aa hypothetical protein SEHO0A_00325 | |||
| 949 | R | type III restriction-modification system protein | SenNS009ORFCP | |
| 951 | prepilin | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 56 | Uncharacterised protein | |||
| 58 | R | StyUK1MrrP (100% identity) | SenNS009MrrP | |
| 59 | 62 aa hypothetical protein | |||