Salmonella enterica subsp. enterica serovar Heidelberg C_NS-004 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg C_NS-004 RM systems
Ref: Deblais,L. et al. unpublished
REBASE ref # 28192
Contig set: 4,769,734 bp
GenBank #: PGWL00000000 (NZ_PGWL00000000)
REBASE acronym: SenNS004
Org_num: 33695
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 150 | 93 aa hypothetical protein | |||
| 151 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenNS004ORFEP |
| 154 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.SenNS004ORFEP |
| 158 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenNS004ORFEP |
| 165 | 104 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 51 | DUF1998 domain-containing protein | |||
| 56 | RM | Sens12373ORF19575P (100% identity) | GATCAG | SenNS004ORFDP |
| 62 | 151 aa hypothetical protein | |||
| 95 | tRNA-dihydrouridine synthase B | |||
| 96 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenNS004ORFCP |
| 98 | 102 aa hypothetical protein | |||
| 108 | DNA adenine methylase | |||
| 111 | M | M.StyTDamP (100% identity) | GATC | M.SenNS004DamP |
| 112 | DamX protein | |||
| 95 | 79 aa hypothetical protein | |||
| 96 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.SenNS004ORFAP |
| 97 | exonuclease | |||
| 1280 | DMT superfamily transporter inner membrane protein | |||
| 1281 | V | V.StyTDcmP (100% identity) | V.SenNS004DcmP | |
| 1282 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.SenNS004DcmP |
| 1284 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 79 | metabolite transport protein | |||
| 81 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.SenNS004ORFBP |
| 82 | R | SenNS033ORFAP (100% identity) | CAGAG | SenNS004ORFBP |
| 84 | 71 aa hypothetical protein SEHO0A_00325 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 164 | Uncharacterised protein | |||
| 166 | R | StyUK1MrrP (100% identity) | SenNS004MrrP | |
| 167 | 62 aa hypothetical protein | |||