Pseudomonas aeruginosa PAL0.1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pseudomonas aeruginosa PAL0.1 RM systems
Ref: Grandjean,T. et al. unpublished
REBASE ref # 28261
Contig set: 7,040,354 bp
GenBank #: QFRL00000000 (NZ_QFRL00000000)
REBASE acronym: PaePAL01
Org_num: 33559
All begin DI492_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 32220 | 70 aa hypothetical protein | |||
| 32225 | M | M.PaesAG1ORF2671P (100% identity) | CCCANNNNNNTCG | M.PaePAL01ORF32225P |
| 32230 | S | S.PaesAG1ORF2671P (100% identity) | CCCANNNNNNTCG | S.PaePAL01ORF32225P |
| 32235 | 731 aa hypothetical protein | |||
| 32240 | 245 aa hypothetical protein | |||
| 32245 | 547 aa hypothetical protein | |||
| 32250 | ATP-dependent helicase | |||
| 32255 | 950 aa hypothetical protein | |||
| ??? | restriction endonuclease | |||
| 32260 | restriction endonuclease | |||
| 32265 | R | PaesAG1ORF2679P (100% identity) | CCCANNNNNNTCG | PaePAL01ORF32225P |
| 31770 | peptidase M15 | |||
| ??? | R | PaeAATYAORF60P (100% identity) | CACNNNNNNNRTGT | PaePAL01ORF31785P |
| 31785 | M | M.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | M.PaePAL01ORF31785P |
| 31790 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.PaePAL01ORF31785P |
| 31795 | DUF91 domain-containing protein | |||
| 24965 | 94 aa hypothetical protein | |||
| 24970 | M | M.PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | M.PaePAL01ORF24970P |
| 24975 | S | S.PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | S.PaePAL01ORF24970P |
| 24980 | transcriptional regulator | |||
| 24985 | R | PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | PaePAL01ORF24970P |
| 24990 | ArsR family transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17720 | 447 aa hypothetical protein | |||
| 17725 | M | M.PstSDMORFCP (96% identity) | M.PaePAL01ORF17725P | |
| 17730 | transcriptional regulator | |||
| 10235 | Arc family DNA-binding protein | |||
| 10240 | M | M.PaesAG1ORF5438P (100% identity) | M.PaePAL01ORF10240P | |
| 10245 | nucleoid-associated protein YejK | |||
| 32615 | 379 aa hypothetical protein | |||
| 32620 | M | M.PaesAG1ORF2662P (98% identity) | M.PaePAL01ORF32620P | |
| 24000 | 82 aa hypothetical protein | |||
| 24005 | R | PmeTTORFEP (100% identity) | CTCGAG | PaePAL01ORF24010P |
| ??? | M | M.PmeTTORFEP (100% identity) | CTCGAG | M.PaePAL01ORF24010P |
| 24015 | recombinase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 32250 | ATP-dependent helicase | |||
| 32255 | R | PaeUKJ55McrBP (100% identity) | PaePAL01McrBP | |
| ??? | R | PaesAG1McrCP (100% identity) | PaePAL01McrCP | |
| 32265 | type I restriction endonuclease subunit R | |||