Escherichia coli NCTC9085 |
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Putative Escherichia coli NCTC9085 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 4,969,367 bp
GenBank #: LR134078
REBASE acronym: Eco9085
Org_num: 32698
All begin NCTC9085_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4202 | methylated adenine and cytosine restriction | |||
| 4203 | R | Eco3638ORF10320P (100% identity) | TGANNNNNNNNTGCT | Eco9085IP |
| 4204 | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.Eco9085I |
| 4205 | S | S.EcosBORF22035P (100% identity) | TGANNNNNNNNTGCT | S.Eco9085I |
| 4207 | 5-methylcytosine-specific restriction enzyme | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 371 | DamX protein | |||
| 372 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco9085DamP |
| 373 | ribulose-phosphate 3-epimerase | |||
| 495 | membrane protein | |||
| 496 | M | M.Eco3638ORF16855P (100% identity) | ATGCAT | M.Eco9085ORF496P |
| 497 | DNA-binding protein Fis | |||
| 860 | TraG-like protein, N-terminal region | |||
| ??? | M | M.Sen8545ORF11550P (65% identity) | M.Eco9085ORF861P | |
| ??? | regulator | |||
| 2033 | phosphohydrolase | |||
| 2034 | M | M.Eco3638DcmP (100% identity) | CCWGG | M.Eco9085DcmP |
| 2035 | V | V.SflC32DcmP (74% identity) | V.Eco9085DcmP | |
| 2036 | DMT superfamily transporter inner | |||
| 3272 | replication protein for prophage | |||
| 3273 | M | M.Eco9084ORF2886P (100% identity) | GATC | M.Eco9085ORF3273P |
| 3274 | TraR/DksA family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4201 | GTP-binding protein YjiA | |||
| 4202 | R | Ssp28760MrrP (100% identity) | Eco9085MrrP | |
| 4203 | type I restriction enzyme EcoKI subunit R | |||
| 4205 | specificity determinant for hsdM and hsdR | |||
| 4207 | R | Eco3638McrBP (98% identity) | Eco9085McrBP | |
| 4208 | R | Eco3638McrCP (100% identity) | Eco9085McrCP | |