Escherichia coli NCTC9022 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli NCTC9022 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 5,167,677 bp
GenBank #: LR134237
REBASE acronym: Eco9022
Org_num: 32337
All begin NCTC9022_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4252 | Uncharacterized conserved protein | |||
| 4253 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | Eco9022IP |
| ??? | M | M.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | M.Eco9022I |
| 4255 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.Eco9022I |
| 4257 | Uncharacterized conserved protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 362 | DamX protein | |||
| 363 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco9022DamP |
| 364 | ribulose-phosphate 3-epimerase | |||
| 484 | membrane protein | |||
| 485 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco9022ORF485P |
| 486 | DNA-binding protein Fis | |||
| 2048 | phosphohydrolase | |||
| 2049 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco9022DcmP |
| 2050 | V | V.EcosC25DcmP (100% identity) | V.Eco9022DcmP | |
| 2051 | DMT superfamily transporter inner | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4297 | Uncharacterised protein | |||
| 4298 | M | M.EcoUTI89I (100% identity) | CACAG | M.Eco9022II |
| 4299 | R | EcoUTI89IP (100% identity) | CACAG | Eco9022IIP |
| 4300 | phage integrase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2915 | protein ninx | |||
| 2916 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco9022ORF2916P |
| 2917 | recombination protein ninB from phage origin | |||