Bifidobacterium longum DS18_3 |
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Putative Bifidobacterium longum DS18_3 RM systems
Ref: Barnaba,T.J. et al. Genome Announc 6 (26), e00610-18 (2018)
REBASE ref # 27060
Contig set: 2,448,259 bp
GenBank #: QDJB00000000 (NZ_QDJB00000000)
REBASE acronym: Blo183
Org_num: 31792
All begin DD721_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5410 | isoleucine--tRNA ligase | |||
| 5415 | S | S1.BloDORF1959BP (100% identity) | S1.Blo183ORF5435P | |
| 5420 | site-specific integrase | |||
| ??? | S | S2.Blo93ORF970P (100% identity) | S2.Blo183ORF5435P | |
| 5430 | restriction endonuclease | |||
| 5435 | M | M.BloF2ORF8200P (100% identity) | M.Blo183ORF5435P | |
| 5440 | S | S.BloF2ORF8200P (99% identity) | S3.Blo183ORF5435P | |
| 5445 | AAA family ATPase | |||
| 5450 | R | BloF2ORF8200P (100% identity) | Blo183ORF5435P | |
| 5455 | cell filamentation protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7505 | 290 aa hypothetical protein | |||
| 7510 | M | M.BloF2ORF5620P (100% identity) | M.Blo183ORF7510P | |
| 7515 | 221 aa hypothetical protein | |||
| 8775 | 209 aa hypothetical protein | |||
| ??? | RM | Blo93ORF7860P (100% identity) | Blo183ORF8785P | |
| 8790 | 59 aa hypothetical protein | |||
| 5965 | 282 aa hypothetical protein | |||
| ??? | M | M.BloW11ORF1386P (100% identity) | RGATCY | M.Blo183ORF5970P |
| 5975 | R | BloW11ORF1386P (100% identity) | RGATCY | Blo183ORF5970P |
| 5980 | 330 aa hypothetical protein | |||
| 8900 | 67 aa hypothetical protein | |||
| 8905 | M | M.BloF2ORF5205P (96% identity) | M.Blo183ORF8905P | |
| 8910 | 113 aa hypothetical protein | |||
| 335 | 588 aa hypothetical protein | |||
| 340 | RM | BloF2ORF2160P (100% identity) | Blo183ORF340P | |
| 345 | BREX system P-loop protein BrxC | |||
| 995 | 71 aa hypothetical protein | |||
| 1000 | M | M.BloF2ORF1495P (100% identity) | M.Blo183ORF1000P | |
| 1005 | R | BloF2ORF1495P (100% identity) | Blo183ORF1000P | |
| 1010 | site-specific integrase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | restriction endonuclease subunit S | |||
| 5430 | R | BloNMrrP (100% identity) | Blo183MrrP | |
| 5435 | type I restriction-modification system subunit | |||