Salmonella enterica subsp. enterica serovar Typhimurium CFSAN068042 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CFSAN068042 RM systems
Ref: Frazao,M. unpublished
REBASE ref # 27070
Contig set: 4,852,382 bp
GenBank #: PHIR00000000 (NZ_PHIR00000000)
REBASE acronym: Sen68042
Org_num: 31383
All begin CU637_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9165 | endoribonuclease SymE | |||
| 9170 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen68042ORF9175P |
| 9175 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen68042ORF9175P |
| 9180 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen68042ORF9175P |
| 9185 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17350 | BREX system P-loop protein BrxC | |||
| 17355 | RM | StyUK1IV (100% identity) | GATCAG | Sen68042ORF17355P |
| 17360 | 363 aa hypothetical protein | |||
| 19400 | ribulose-phosphate 3-epimerase | |||
| 19405 | M | M.StyTDamP (100% identity) | GATC | M.Sen68042DamP |
| 19410 | SPOR domain-containing protein | |||
| 18540 | 221 aa hypothetical protein | |||
| 18545 | M | M.Sens29958ORF6205P (100% identity) | M.Sen68042ORF18545P | |
| 18550 | DUF550 domain-containing protein | |||
| 18325 | Fis family transcriptional regulator | |||
| 18330 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen68042ORF18330P |
| 18335 | DUF2556 domain-containing protein | |||
| 14985 | phosphohydrolase | |||
| 14990 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen68042DcmP |
| 14995 | V | V.StyUK1DcmP (100% identity) | V.Sen68042DcmP | |
| 15000 | drug/metabolite exporter YedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13930 | 33 aa hypothetical protein | |||
| 13935 | R | StyUK1IP (99% identity) | CAGAG | Sen68042ORF13940P |
| 13940 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen68042ORF13940P |
| 13945 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9180 | type I restriction-modification system | |||
| 9185 | R | StyUK1MrrP (100% identity) | Sen68042MrrP | |
| 9190 | 95 aa hypothetical protein | |||