Salmonella enterica subsp. enterica serovar Typhimurium CFSAN068040 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CFSAN068040 RM systems
Ref: Frazao,M. unpublished
REBASE ref # 27070
Contig set: 5,121,736 bp
GenBank #: PHIT00000000 (NZ_PHIT00000000)
REBASE acronym: Sen68040
Org_num: 31385
All begin CU490_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12910 | endoribonuclease SymE | |||
| 12915 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen68040ORF12920P |
| 12920 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen68040ORF12920P |
| 12925 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen68040ORF12920P |
| 12930 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24685 | DUF550 domain-containing protein | |||
| 24690 | M | M.Sens29958ORF6205P (100% identity) | M.Sen68040ORF24690P | |
| 24695 | 221 aa hypothetical protein | |||
| 865 | ribulose-phosphate 3-epimerase | |||
| 870 | M | M.StyTDamP (100% identity) | GATC | M.Sen68040DamP |
| 875 | SPOR domain-containing protein | |||
| 21815 | nuclease | |||
| 21820 | M | M.YpsF1ORFCP (100% identity) | M.Sen68040ORF21820P | |
| 21825 | DUF1173 domain-containing protein | |||
| 45 | DUF2556 domain-containing protein | |||
| 50 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen68040ORF50P |
| 55 | Fis family transcriptional regulator | |||
| 25115 | DNA-binding protein | |||
| 25120 | M | M.YpsF1ORFDP (100% identity) | M.Sen68040ORF25120P | |
| 25125 | 284 aa hypothetical protein | |||
| 25735 | 202 aa hypothetical protein | |||
| 25740 | M | M.YpsF1ORFBP (100% identity) | M.Sen68040ORF25740P | |
| 25745 | 108 aa hypothetical protein | |||
| 5780 | 73 aa hypothetical protein | |||
| 5785 | M | M.StyR64ORFAP (100% identity) | M.Sen68040ORF5785P | |
| 5790 | 0 aa hypothetical protein | |||
| 12740 | 363 aa hypothetical protein | |||
| 12745 | RM | StyUK1IV (100% identity) | GATCAG | Sen68040ORF12745P |
| 12750 | BREX system P-loop protein BrxC | |||
| 15795 | phosphohydrolase | |||
| 15800 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen68040DcmP |
| 15805 | V | V.StyUK1DcmP (100% identity) | V.Sen68040DcmP | |
| 15810 | drug/metabolite exporter YedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13865 | 33 aa hypothetical protein | |||
| 13870 | R | StyUK1IP (99% identity) | CAGAG | Sen68040ORF13875P |
| 13875 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen68040ORF13875P |
| 13880 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12925 | type I restriction-modification system | |||
| 12930 | R | StyUK1MrrP (100% identity) | Sen68040MrrP | |
| 12935 | 95 aa hypothetical protein | |||