Salmonella enterica subsp. enterica serovar Typhimurium CFSAN068039 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CFSAN068039 RM systems
Ref: Frazao,M. unpublished
REBASE ref # 27070
Contig set: 4,754,221 bp
GenBank #: PHIU00000000 (NZ_PHIU00000000)
REBASE acronym: Sen68039
Org_num: 31386
All begin CU512_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1910 | endoribonuclease SymE | |||
| 1915 | S | S.SenNCTR462ORF2380P (100% identity) | CCANNNNNNNNTGAG | S.Sen68039ORF1920P |
| ??? | M | M.SenNCTR462ORF2380P (100% identity) | CCANNNNNNNNTGAG | M.Sen68039ORF1920P |
| 1925 | R | SenNCTR462ORF2380P (100% identity) | CCANNNNNNNNTGAG | Sen68039ORF1920P |
| 1930 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12595 | exonuclease | |||
| 12600 | M | M.SspsA7ORF8410P (100% identity) | GATC | M.Sen68039ORF12600P |
| 12605 | DUF4060 domain-containing protein | |||
| 22445 | 75 aa hypothetical protein | |||
| 22450 | M | M.SenSH7ORF6070P (100% identity) | M.Sen68039ORF22450P | |
| 22455 | replication endonuclease | |||
| 22465 | 62 aa hypothetical protein | |||
| 22470 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.Sen68039ORF22470P |
| 22475 | R | SenS16ORF16875P (100% identity) | CGGCCG | Sen68039ORF22470P |
| 22480 | phage portal protein | |||
| 23730 | Fis family transcriptional regulator | |||
| 23735 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen68039ORF23735P |
| 23740 | DUF2556 domain-containing protein | |||
| 18750 | drug/metabolite exporter YedA | |||
| 18755 | V | V.StyUK1DcmP (100% identity) | V.Sen68039DcmP | |
| 18760 | M | M.SenNCTR462DcmP (100% identity) | CCWGG | M.Sen68039DcmP |
| 18765 | phosphohydrolase | |||
| 5795 | cell division protein DamX | |||
| 5800 | M | M.StyTDamP (100% identity) | GATC | M.Sen68039DamP |
| 5805 | ribulose-phosphate 3-epimerase | |||
| 4660 | Eaa protein | |||
| 4665 | M | M.SenSH7ORF6615P (100% identity) | M.Sen68039ORF4665P | |
| 4670 | 224 aa hypothetical protein | |||
| 4730 | PerC family transcriptional regulator | |||
| 4735 | M | M.SenS16ORF9325P (100% identity) | M.Sen68039ORF4735P | |
| 4740 | RusA family crossover junction | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8850 | MFS transporter | |||
| 8855 | M | M.SenST224ORF2660P (100% identity) | CAGAG | M.Sen68039ORF8855P |
| 8860 | R | SenNCTR462ORF9180P (99% identity) | CAGAG | Sen68039ORF8855P |
| 8865 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1925 | type I restriction-modification system | |||
| 1930 | R | SenNCTR462MrrP (100% identity) | Sen68039MrrP | |
| 1935 | 95 aa hypothetical protein | |||