Salmonella enterica subsp. enterica serovar Typhimurium CFSAN068033 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium CFSAN068033 RM systems
Ref: Frazao,M. unpublished
REBASE ref # 27070
Contig set: 5,001,830 bp
GenBank #: PHJA00000000 (NZ_PHJA00000000)
REBASE acronym: Sen68033
Org_num: 31392
All begin CU494_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4285 | restriction endonuclease | |||
| 4290 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen68033ORF4295P |
| 4295 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen68033ORF4295P |
| 4300 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen68033ORF4295P |
| 4305 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21930 | nuclease | |||
| 21935 | M | M.YpsF1ORFCP (100% identity) | M.Sen68033ORF21935P | |
| 21940 | DUF1173 domain-containing protein | |||
| 17970 | 108 aa hypothetical protein | |||
| 17975 | M | M.YpsF1ORFBP (100% identity) | M.Sen68033ORF17975P | |
| 17980 | 202 aa hypothetical protein | |||
| 10815 | DUF2556 domain-containing protein | |||
| 10820 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen68033ORF10820P |
| 10825 | Fis family transcriptional regulator | |||
| 3265 | drug/metabolite exporter YedA | |||
| 3270 | V | V.StyUK1DcmP (100% identity) | V.Sen68033DcmP | |
| 3275 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen68033DcmP |
| 3280 | phosphohydrolase | |||
| 2000 | 221 aa hypothetical protein | |||
| 2005 | M | M.Sens29958ORF6205P (100% identity) | M.Sen68033ORF2005P | |
| 2010 | DUF550 domain-containing protein | |||
| 18080 | DNA-binding protein | |||
| 18085 | M | M.YpsF1ORFDP (100% identity) | M.Sen68033ORF18085P | |
| 18090 | 284 aa hypothetical protein | |||
| 4465 | BREX system P-loop protein BrxC | |||
| 4470 | RM | StyUK1IV (100% identity) | GATCAG | Sen68033ORF4470P |
| 4475 | 363 aa hypothetical protein | |||
| 7885 | SPOR domain-containing protein | |||
| 7890 | M | M.StyTDamP (100% identity) | GATC | M.Sen68033DamP |
| 7895 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1650 | 33 aa hypothetical protein | |||
| 1655 | R | StyUK1IP (99% identity) | CAGAG | Sen68033ORF1660P |
| 1660 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen68033ORF1660P |
| 1665 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4280 | 95 aa hypothetical protein | |||
| 4285 | R | StyUK1MrrP (100% identity) | Sen68033MrrP | |
| 4290 | type I restriction-modification system | |||