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Putative Agrobacterium tumefaciens 1D1460 RM systems
Ref: Cho,S.-T. et al. unpublished
REBASE ref # 27623
Sequence length: | GenBank #: | |
chromosome circular: | 2,867,449 bp | CP032926 |
chromosome linear: | 2,081,870 bp | CP032927 |
REBASE acronym: Atu1460
Org_num: 31484
All begin At1D1460_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome circular | ||||
14370 | 746 aa hypothetical protein | |||
14380 | M | M.AtuSta005ORF7230P (100% identity) | M.Atu1460ORF14380P | |
14390 | 294 aa hypothetical protein | |||
14400 | 73 aa hypothetical protein | |||
14410 | M | M.AtuSta005ORF7240P (97% identity) | M.Atu1460ORF14410P | |
14420 | 91 aa hypothetical protein | |||
chromosome linear | ||||
28130 | site-specific recombinase, DNA invertase Pin | |||
28140 | R | AtuSta005ORF23310P (100% identity) | Atu1460ORF28160P | |
28150 | V | V.AtuSta005ORF23310P (100% identity) | V.Atu1460ORF28160P | |
28160 | M | M.AtuSta005ORF23310P (100% identity) | M.Atu1460ORF28160P | |
28170 | 90 aa hypothetical protein | |||
39780 | 119 aa hypothetical protein | |||
39790 | M | M.AtuSta005ORF17405P (100% identity) | M.Atu1460ORF39790P | |
39800 | 83 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome circular | ||||
14380 | DNA (cytosine-5)-methyltransferase 1 | |||
14390 | R | VphS1Mrr3P (36% identity) | Atu1460MrrP | |
14400 | 73 aa hypothetical protein | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome circular | ||||
4290 | 366 aa hypothetical protein | |||
4300 | M | M.AtuYol002ORF2230P (100% identity) | GANTC | M.Atu1460ORF4300P |
4310 | antitoxin |