Salmonella enterica subsp. enterica serovar Typhimurium OLF-FRS1-STCopenhagen-57 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium OLF-FRS1-STCopenhagen-57 RM systems
Ref: Duceppe,M.-O. et al. unpublished
REBASE ref # 27136
Contig set: 4,848,689 bp
GenBank #: PYVC00000000 (NZ_PYVC00000000)
REBASE acronym: SenC57
Org_num: 31144
All begin C5I01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23500 | endoribonuclease SymE | |||
| 23505 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenC57ORF23510P |
| 23510 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.SenC57ORF23510P |
| 23515 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenC57ORF23510P |
| 23520 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18135 | ribulose-phosphate 3-epimerase | |||
| 18140 | M | M.StyTDamP (100% identity) | GATC | M.SenC57DamP |
| 18145 | cell division protein DamX | |||
| 10110 | drug/metabolite exporter YedA | |||
| 10115 | V | V.StyUK1DcmP (100% identity) | V.SenC57DcmP | |
| 10120 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenC57DcmP |
| 10125 | phosphohydrolase | |||
| 17655 | Fis family transcriptional regulator | |||
| 17660 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenC57ORF17660P |
| 17665 | DUF2556 domain-containing protein | |||
| 24450 | 62 aa hypothetical protein | |||
| 24455 | M | M.StyUK1ORFAP (100% identity) | M.SenC57ORF24455P | |
| 24460 | 73 aa hypothetical protein | |||
| 10365 | RusA family crossover junction | |||
| 10370 | M | M.StyUK1V (100% identity) | GATC | M.SenC57ORF10370P |
| 10375 | 174 aa hypothetical protein | |||
| 23330 | 363 aa hypothetical protein | |||
| 23335 | RM | StyUK1IV (100% identity) | GATCAG | SenC57ORF23335P |
| 23340 | BREX system P-loop protein BrxC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1575 | MFS transporter | |||
| 1580 | M | M.StyUK1I (100% identity) | CAGAG | M.SenC57ORF1580P |
| 1585 | R | StyUK1IP (99% identity) | CAGAG | SenC57ORF1580P |
| 1590 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23515 | type I restriction-modification system | |||
| 23520 | R | StyUK1MrrP (100% identity) | SenC57MrrP | |
| 23525 | 95 aa hypothetical protein | |||